XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGATCCGCGGAATTCCA
ACCATTGCTTCTCTATTTGGTGTCAGGAGAACCATAATGTGGTTTCATTC
AAATTCCTTAGCAACTTTTGAAGACAAGGACTTTAAAAAAATCATAGCCC
TGTTTGTATCTAAAGACAACAGGGATCCCTCTCTTTGAAAAGGCTATGTG
CATGCCTGAGCTCAGGAGTCTTCCTTTACAAATATCCCTTATAACCTGTT
TGAAAATTTATTTCAGTAAATCTTCAACTCTGCTTCATACTGTCTTTTCC
AAAGATTAGCTGTTGTTACTACTGTAAGAAACTTTAAATATTGTTTTCCA
TCAAATACAATAAACCATGTTTTTAACAAGGAATTTAAATCTTTTTTATT
TTCCCAACTTTATTAGACATTTATGCAAATATTCAAATCCCCTACCCAGC
AAATTTTAGTTTACATGAAGGCTCTGCATCAGCTGTGTTCTCAGATTACA
GTTTCTGACCCCTTTCTCCTCCATTTACTGTATGTTTATTCTATTAAATC
TGGCCAATCTTAAAAGACCATAGTCAATGAAGAAAGGCACATCTCCCACC
TGCCTTAGAATAATATCCAAGTGCACTTTCTGTCCCTAGTGCTTGATCTG
TTCTGGTGACCAATGCCCCTTCCCCAACAAGAGTAAGTTTGCTTTGTCCA
GATATTTCAGAGTGGTGA

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAGATTGGAGGGACTTTCTAGGAAGTTCCAAAGA
TACAAGATGAGGGAGGCTCTTAAGAATCAATGTAGGTGACCTTTGTTGAA
TTGCCAAACAGTGCAGAGATGAAACCTGAAGAGTCCATCTTCAGTAGACA
GATAGGACCCACAGGGGAGGGATGGGACCACCAACACAACTTTGAAATTT
TTACTCAAAACTTGTCCTGTCCGAAAGAAATTTAAGGACAGAGAAGGAGC
AGAGACTGAAGGAATGGCCAACCAATCACCAGCCCGTTTCTGAGACCCAT
TCCATGGGTAGATAACAATCCCTCACATTATTAATGATGCTGAGTTTTGA
TTGCACACAGTATCCAAACATAACAGCCCTCTGAGAGGCACTACCCAAGC
AGCTGACTGAAACAAATGCAGATACCTAGATAAGCATTGGATGGAGGATG
TGGACCCCTGTGGAAGAGTTAAGGGAAGTATTGAAAGACCTCAAGGTAAC
GACAATCCTACAGGAAAACCAACAGTGTACAGTAACCTTGGCTTCTGGGC
ACTCCCTGAGTCTGAGCCACCAACCATAAAGCATACATGGGCTGGTCCAG
GGCCCCAGAACATATGTGGCATAGGGCTATCAAGTCTGACCTCAGTTGGA
GAGGCTGCAAAAAAATT

Query= MSMg01no153_m19.b1 MSMg01no153_m19.b1 CHROMAT_FILE:
MSMg01no153_m19.b1 PHD_FILE: MSMg01no153_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:15 2005
         (632 letters)



>mm_chr1_116570726_116571759
          Length = 1034

 Score = 1152 bits (596), Expect = 0.0
 Identities = 624/634 (98%), Gaps = 2/634 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatttggtgtcaggagaaccataatgtggtttcattcaaattccttagcaacttttgaag 60
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatttggtgtcaggggaaccataatgtggtttcattcaaattccttagcaacttttgaag 260

                                                                       
Query: 61  acaaggactttaaaaaaa--tcatagccctgtttgtatctaaagacaacagggatccctc 118
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaggactttaaaaaaaaatcatagccctgtttgtatctaaagacaacagggatccctc 320

                                                                       
Query: 119 tctttgaaaaggctatgtgcatgcctgagctcaggagtcttcctttacaaatatccctta 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctttgaaaaggctatgtgcatgcctgagctcaggagtcttcctttacaaatatccctta 380

                                                                       
Query: 179 taacctgtttgaaaatttatttcagtaaatcttcaactctgcttcatactgtcttttcca 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taacctgtttgaaaatttatttcagtaaatcttcaactctgcttcatactgtcttttcca 440

                                                                       
Query: 239 aagattagctgttgttactactgtaagaaactttaaatattgttttccatcaaatacaat 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagattagctgttgttactactgtaagaaactttaaatattgttttccatcaaatacaat 500

                                                                       
Query: 299 aaaccatgtttttaacaaggaatttaaatcttttttattttcccaactttattagacatt 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaccatgtttttaacaaggaatttaaatcttttttattttcccaactttattagacatt 560

                                                                       
Query: 359 tatgcaaatattcaaatcccctacccagcaaattttagtttacatgaaggctctgcatca 418
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 tatgcaaatattcaaatcccctacccagcaaattttagtttacataaaggctctgcatca 620

                                                                       
Query: 419 gctgtgttctcagattacagtttctgacccctttctcctccatttactgtatgtttattc 478
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctgtgttctcagattacagtgtctgacccctttctcctccatttactgtatgtttattc 680

                                                                       
Query: 479 tattaaatctggccaatcttaaaagaccatagtcaatgaagaaaggcacatctcccacct 538
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tattaaatctagccaatcttaaaagaccatagtcaatgaagaaaggcacatctcccacct 740

                                                                       
Query: 539 gccttagaataatatccaagtgcactttctgtccctagtgcttgatctgttctggtgacc 598
           ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 741 gccttagaataatatccaagtgcactttcggttcctagtgcttgatctgttctggtgacc 800

                                             
Query: 599 aatgccccttccccaacaagagtaagtttgcttt 632
           |||| |||||||||||||||||||| ||||||||
Sbjct: 801 aatgtcccttccccaacaagagtaaatttgcttt 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1034
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1024
Effective search space:   636928
Effective search space used:   636928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)