Query= MSMg01no156_i07.b1 MSMg01no156_i07.b1 CHROMAT_FILE:
MSMg01no156_i07.b1 PHD_FILE: MSMg01no156_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:40 2005
(312 letters)
>mm_chr1_159425521_159426232
Length = 712
Score = 574 bits (297), Expect = e-168
Identities = 306/309 (99%)
Strand = Plus / Plus
Query: 4 ggaattcacagggacccaccagcctctgcttccagagagctggggctaaaggactgagtc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacagggacccaccagcctctgcttccagagagctggggctaaaggactgagtc 263
Query: 64 tccacgcccagctacagttggagttttgactatacttagtctttcatattggctctaatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tccacgcccagctacagttggagttttgactatacttagtctttcatattggctctaatt 323
Query: 124 tgttcgcacccccatctggcacataaattcttgcaggctagggctgtgcattttattttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 324 tgttcgcacccccatctggcacataaattcttgcaggctagggctgtgcatttgattttt 383
Query: 184 ttctatatcagtgttgcaggaatgggcatttaatccctggtaattgattgctggagcaca 243
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttctatgtcagtgttgcaggaatgggcatttaatccctggtaattgattgctggagcaca 443
Query: 244 ttgctgtaactttagtttttttaaaatctatttttaatgatggttcttaaatgctttaac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgctgtaactttagtttttttaaaatctatttttaatgatggttcttaaatgctttaac 503
Query: 304 cgctcttgt 312
| |||||||
Sbjct: 504 ctctcttgt 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_i07.g1 MSMg01no156_i07.g1 CHROMAT_FILE:
MSMg01no156_i07.g1 PHD_FILE: MSMg01no156_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:40 2005
(494 letters)
>mm_chr1_159560537_159561429
Length = 893
Score = 932 bits (482), Expect = 0.0
Identities = 491/494 (99%), Gaps = 1/494 (0%)
Strand = Plus / Minus
Query: 1 ctatgggaacttttttcatgcaagaaactagtaaaaactagtttaattcactactcaatg 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 693 ctatgggaacttttttcatgcaagaaactagtaaaaacgagtttaattcactactcaatg 634
Query: 61 ataagattcgcctggccttgtctgtcttcacaattagacagcaatagtcaaccatcaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ataagattcgcctggccttgtctgtcttcacaattagacagcaatagtcaaccatcaaac 574
Query: 121 atttatggaggaggcattcaagaccaaccaatgcctggttgatacaacagctgatgacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 atttatggaggaggcattcaagaccaaccaatgcctggttgatacaacagctgatgacag 514
Query: 181 gcatagaagccagtctaagatcaccaagcctactccaggtgagcatagcaaccaactacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gcatagaagccagtctaagatcaccaagcctactccaggtgagcatagcaaccaactacc 454
Query: 241 catggtctcatggctgttgtttcaaggtctgggttttgagattacttggcatcatttaga 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cacggtctcatggctgttgtttcaaggtctgggttttgagattacttggcatcatttaga 394
Query: 301 caataaaaatctaagtttaaaggtatctttttaaccatgctcaaacttaataggaaacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 caataaaaatctaagtttaaaggtatctttttaaccatgctcaaacttaataggaaacca 334
Query: 361 tcttaatttaaaatgtttagataatgtcaaacaacctgcaattttttcaaatatatttat 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 333 tcttaatttaaaatgtttagataatgtcaaacaacctgcaattttttc-aatatatttat 275
Query: 421 ccagagtcatgaaagaataagctaaagtgggtgacaaaattttcagataattgatggttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ccagagtcatgaaagaataagctaaagtgggtgacaaaattttcagataattgatggttt 215
Query: 481 cctcttaaagtatg 494
||||||||||||||
Sbjct: 214 cctcttaaagtatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 893
Length adjustment: 10
Effective length of query: 484
Effective length of database: 883
Effective search space: 427372
Effective search space used: 427372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
