Query= MSMg01no156_j23.b1 MSMg01no156_j23.b1 CHROMAT_FILE:
MSMg01no156_j23.b1 PHD_FILE: MSMg01no156_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:48 2005
(262 letters)
>mm_chr1_163330714_163331375
Length = 662
Score = 449 bits (232), Expect = e-130
Identities = 238/240 (99%)
Strand = Plus / Plus
Query: 1 gtgccctacactgtccaagaacatgccattttcttcccacttcatgggttttgtgttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgccctacactgtccaagaacatgccattttcttcccacttcatgggttttgtgttcct 260
Query: 61 ggaaaatgagcattaatcctttgtgatcatgtgagtcaaaggagccacggggagtgttat 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ggaaaatgagcattaatcctttgtgatcatgtgagtcaaaggagccatggggagtgttat 320
Query: 121 gagttaacacgtgaaaacacaatgacaacatacagcatgcttccctctctatagtcactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagttaacacgtgaaaacacaatgacaacatacagcatgcttccctctctatagtcactg 380
Query: 181 gtgagataaacagaagaattactgtgaaattggaatctctaacatcccatgctttgctgg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 gtgagataaacagaagaattactgtgaaattggaatctctaacatcccatgcttggctgg 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 662
Length adjustment: 9
Effective length of query: 253
Effective length of database: 653
Effective search space: 165209
Effective search space used: 165209
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no156_j23.g1 MSMg01no156_j23.g1 CHROMAT_FILE:
MSMg01no156_j23.g1 PHD_FILE: MSMg01no156_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:48 2005
(294 letters)
>mm_chr1_163414835_163415527
Length = 693
Score = 551 bits (285), Expect = e-161
Identities = 291/293 (99%), Gaps = 1/293 (0%)
Strand = Plus / Minus
Query: 1 ttaggatgctcttttgaggtcttcctatcataaaatgcaaaggctgaaaaggatttaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttaggatgctcttttgaggtcttcctatcataaaatgcaaaggctgaaaaggatttaact 433
Query: 61 tctccatcttcccaatgatggatttatgggtacagagatgtaactatttaggattcctaa 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 432 tctccatcttcccaatgatggatttatgggtacagagacgtaactatttaggattcctaa 373
Query: 121 aattctgcttctactctgttaagtaattaagtacttaatttgcaagtattgcaataacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aattctgcttctactctgttaagtaattaagtacttaatttgcaagtattgcaataacac 313
Query: 181 acactctactaattgataagtatgaatatatttaagtttaatgacaatatatttaaacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 acactctactaattgataagtatgaatatatttaagtttaatgacaatatatttaaacat 253
Query: 241 tcattttcctcagatttttttaaggaccaagatattattctaaatagtccaaa 293
|||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcattttcctcaga-ttttttaaggaccaagatattattctaaatagtccaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 693
Length adjustment: 9
Effective length of query: 285
Effective length of database: 684
Effective search space: 194940
Effective search space used: 194940
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|