Query= MSMg01no157_m20.b1 MSMg01no157_m20.b1 CHROMAT_FILE:
MSMg01no157_m20.b1 PHD_FILE: MSMg01no157_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:13 2005
(320 letters)
>mm_chr1_167813474_167814193
Length = 720
Score = 613 bits (317), Expect = e-180
Identities = 317/317 (100%)
Strand = Plus / Plus
Query: 4 ggaattctgttccaactcatatacctcctttatgatttgaatccttggcaatgcactcca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgttccaactcatatacctcctttatgatttgaatccttggcaatgcactcca 263
Query: 64 tggaagcacaggctttcagagcctcagcatccttaacaaaatactatcacccaccccaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggaagcacaggctttcagagcctcagcatccttaacaaaatactatcacccaccccaca 323
Query: 124 gcagccttagatgttagattcaagaacacgtagggtacctagcacttcctcttgtttccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcagccttagatgttagattcaagaacacgtagggtacctagcacttcctcttgtttccc 383
Query: 184 acccttttctaacctactgaagtatgacttaagtgtaaagttaataactttttatcaatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acccttttctaacctactgaagtatgacttaagtgtaaagttaataactttttatcaatt 443
Query: 244 ttcaaattctttaagtgtcacactatcagactggagcacttgcacaatcaagaaaagatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttcaaattctttaagtgtcacactatcagactggagcacttgcacaatcaagaaaagatc 503
Query: 304 ccccaggcctgtgtata 320
|||||||||||||||||
Sbjct: 504 ccccaggcctgtgtata 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_m20.g1 MSMg01no157_m20.g1 CHROMAT_FILE:
MSMg01no157_m20.g1 PHD_FILE: MSMg01no157_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:13 2005
(239 letters)
>mm_chr1_167914927_167915565
Length = 639
Score = 445 bits (230), Expect = e-129
Identities = 236/238 (99%), Gaps = 2/238 (0%)
Strand = Plus / Minus
Query: 1 ggtccaaacacttgaagcttggaagtgtaacactagtccttcagtacta-gctcacaaga 59
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 437 ggtccaaacacttgaagcttggaagtgtaacactagtccttcagtactaggc-cacaaga 379
Query: 60 acttaaaagtgcagaggtgtcacactgaaagcagaccgtctggatatccaaggctcaaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 acttaaaagtgcagaggtgtcacactgaaagcagaccgtctggatatccaaggctcaaga 319
Query: 120 gttactaacattaaacaagtgttactttgcttctgcattcttttcatctatcaaagaatc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gttactaacattaaacaagtgttactttgcttctgcattcttttcatctatcaaagaatc 259
Query: 180 ctcacttgatcattaacataatttcctaagtagtatgttcccttctgccatgttatta 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctcacttgatcattaacataatttcctaagtagtatgttcccttctgccatgttatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
