Query= MSMg01no158_g21.b1 MSMg01no158_g21.b1 CHROMAT_FILE:
MSMg01no158_g21.b1 PHD_FILE: MSMg01no158_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:57 2005
(321 letters)
>mm_chr1_179737489_179738208
Length = 720
Score = 549 bits (284), Expect = e-161
Identities = 308/316 (97%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 4 ggaattcagtggataagacaaatacaccagcccacactttccttatactaaactttagtt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtggataagacaaatacaccagcccacactttccttatactaaactttagtt 263
Query: 64 gcgaattaaatttactccctgtacctgcactgctagcaacattgagctgttttctcttag 123
|||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 264 gcgaattaaattgacttagtgtacctgcactgctagcaacattgagctgtttcctcttag 323
Query: 124 agtgacatacaaagaatgaagattcagttgctcccctcaacatggaaatcatatggctag 183
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 324 agtgacatacaaagaatgaagattcagttgcttccctcaacatggaaatcatatggctag 383
Query: 184 gtggtaattgagtttgttctcaattttatcccacgtttacaaagcctttgacagcaaaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtggtaattgagtttgttctcaattttatcccacgtttacaaagcctttgacagcaaaaa 443
Query: 244 cgctatccctggtatttggcttttaattgcaagaacagccatgactattcatttctgttc 303
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cgctatccgtggtatttggcttttaattgcaagaacagccatgactattcatttctgttc 503
Query: 304 attcttccccatgaaa 319
||||||||| ||||||
Sbjct: 504 attcttccc-atgaaa 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 720
Length adjustment: 9
Effective length of query: 312
Effective length of database: 711
Effective search space: 221832
Effective search space used: 221832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_g21.g1 MSMg01no158_g21.g1 CHROMAT_FILE:
MSMg01no158_g21.g1 PHD_FILE: MSMg01no158_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:57 2005
(292 letters)
>mm_chr1_180028373_180029064
Length = 692
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%)
Strand = Plus / Minus
Query: 1 ctgttctgaatatgagcacatccctcagactgtgcctttgagcatcactcaggatacctg 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctgttctgaatacgagcacatccctcagactgtgcctttgagcatcactcaggatacctg 433
Query: 61 gaggggctcttactctggtccaggtttgaaaggaatcatttgtttgaaaggtctcctggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gaggggctcttactctggtccaggtttgaaaggaatcatttgtttgaaaggtctcctggt 373
Query: 121 cagtggccaagagagcaaatgtagagatacaggtatcccagctaagcatcaatggacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cagtggccaagagagcaaatgtagagatacaggtatcccagctaagcatcaatggacttc 313
Query: 181 caggtggcagggtgagtggcagatatccaggaggctccaacacaatctccatgggaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 caggtggcagggtgagtggcagatatccaggaggctccaacacaatctccatgggaaagg 253
Query: 241 tcagtatgaagtggagatctgcaatgcgacagtcctggaaatccacattgtt 292
|||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcagtaagaagtggagatctgcaatgcgacagtcctggaaatccacattgtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
