ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTTCCCTCCCTCCTAGTTGCTGGCCAGGGCATCACAACTTCAGCTGT
GACAATCCCAGACTCTGTCATTCTGCAGTGGAATTACTCAATTCAGTTTT
CCTTTAGTCAAGATCCACTTCCTCGGAGTTCACAATGCTTCTGGCACAGG
GCTTAGATGCTAAAGATACATAGCTTTGCAAGGCTCTCCGGGATCCTCCA
GGATCTCTTAGATTGTGGGGGAAATAGGTATCTAGCATTACGATTTTGAA
GCAAGTATTTCTGGTATGTTCTCATAACTCACAGAGCCAAATCCAAGGAG
CTGGTGTACACAGCCCTTCAGATATCCCGCTCGAATTTTCTCTTCACTGC
GATGCCCAGACTTTCACCCACCATCTCTATAAGGTGGCATGCTTCCTATG
TTGCTAGGCAACATTAGTAGGCAGAAATTACCCCTTAAAAAGTATTTGGA
CTGTGAGGAACTAAAGTATATGTTTTAAATGCCCGCAGGGGTCACTGAAA
CCAAAAAACAACCCAAAATGCAAAATCAAGGCTCAAGACAATCTTTCTCA
TAAAATTGGTCAAAGATGGAAACCATTTCTTAGTTCTAGAAACAGAGAGC
TGACTTAGAATAACTCTTGGTGATTTAAGGGGAAACGGAAAGATTAAGAC
AGAATAATAGAGGGCGTTAAAATGCCTATATGTAATTCTCATTACT

TACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGCCTCTCTGAGACTAAGATTCCAAGCACA
AGCCACTATGCCTGGCCTTTTCTCTCCATGGATTGTGGAGAGTGTACATT
CAGGGTCTCGTGTTGGTGAAGCAAGCACTTCACTGACTGAGCCATCTCCT
CAACCTAAATGGCAGACACTTAAAGACACATACTTCTCACACAAGAGGCC
AGAGGTGGGAAACTGCTATTATCTCCATAAAGGAAGAAAATAAGGCTTGG
GGACTTCAAGAGGCGTCCCTAAGCTTCTGCCCTCTTCTCTCGGTGCCTAA
CAGGTACTAATTGCTATTAAGAGGCAGCTCTCGTGTGCAGCATGAGCTTT
AAGGCGCTCAAAGCCCCATTGTTTTGAGGAATGTAAATATGTGTGATCGG
AACATTGAAATGCACACTGGACGCTGTCATTCAACTGGATGGGTGCATCA
GCATGGCCACCAATGCTAAGTATGAATGTTTGTCTCTGTAATAATGTGAT
TATCATAGAACTCATGCCACTTGCCTACTTGTGTCTGAGTGGGAGAACAT
GTTTTGCCAAACTCAGGGAGAAACTTTTTCAGCTTTTCAAGTTCACTAAG
CCTCAATGAGATCTACTCACCTTCGGCTTGCCTACATGAAAGTATTCTCA
GAAATGAATATGCCTGGCTGTTTTATTTTCAAAACAGAAAGTG

Query= MSMg01no159_c07.b1 MSMg01no159_c07.b1 CHROMAT_FILE:
MSMg01no159_c07.b1 PHD_FILE: MSMg01no159_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:48 2005
         (323 letters)



>mm_chr1_187511210_187511932
          Length = 723

 Score =  586 bits (303), Expect = e-172
 Identities = 315/319 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttccctccctcctagttgctggccagggcatcacaacttcagctgtgacaatc 64
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattccttccctccctcctagttgctggccagggcatcacagcttcagctgtgacaatc 264

                                                                       
Query: 65  ccagactctgtcattctgcagtggaattactcaattcagttttcctttagtcaagatcca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccagactctgtcattctgcagtggaattactcaattcagttttcctttagtcaagatcca 324

                                                                       
Query: 125 cttcctcggagttcacaatgcttctggcacagggcttagatgctaaagatacatagcttt 184
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttcctcggagttcacaatgcctctggcacagggcttagatgctaaagatacatagcttt 384

                                                                       
Query: 185 gcaaggctctccgggatcctccaggatctcttagattgtgggggaaataggtatctagca 244
           |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 385 gcaaggctctccgggatcctccgggatctctcagattgtgggggaaataggtatctagca 444

                                                                       
Query: 245 ttacgattttgaagcaagtatttctggtatgttctcataactcacagagccaaatccaag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttacgattttgaagcaagtatttctggtatgttctcataactcacagagccaaatccaag 504

                              
Query: 305 gagctggtgtacacagccc 323
           |||||||||||||||||||
Sbjct: 505 gagctggtgtacacagccc 523


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no159_c07.g1 MSMg01no159_c07.g1 CHROMAT_FILE:
MSMg01no159_c07.g1 PHD_FILE: MSMg01no159_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:48 2005
         (291 letters)



>mm_chr1_187659585_187660275
          Length = 691

 Score =  501 bits (259), Expect = e-146
 Identities = 283/291 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcctctctgagactaagattccaagcacaagccactatgcctggccttttctctccatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgcctctctgagactaagattccaagcacaagccactatgcctggccttttctctccatg 567

                                                                       
Query: 61  gattgtggagagtgtacattcagggtctcgtgttggtgaagcaagcacttcactgactga 120
           ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 566 gattgtggagagtatacattcagggtctcgtgtttgtgaagcaagcacttcactgattga 507

                                                                       
Query: 121 gccatctcctcaacctaaatggcagacacttaaagacacatacttctcacacaagaggcc 180
           |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gccaactcctcagcctaaatggcagacacttaaagacacatacttctcacacaagaggcc 447

                                                                       
Query: 181 agaggtgggaaactgctattatctccataaaggaagaaaataaggcttggggacttcaag 240
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 446 agaggtgggaaactgctattatctcgataaaggaagaaaataaggcttggggacttcaag 387

                                                              
Query: 241 aggcgtccctaagcttctgccctcttctctcggtgcctaacaggtactaat 291
           |||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aggcatccctacgcttctgccctcttctctcggtgcctaacaggtactaat 336


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space:   192324
Effective search space used:   192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)