Query= MSMg01no159_k15.b1 MSMg01no159_k15.b1 CHROMAT_FILE:
MSMg01no159_k15.b1 PHD_FILE: MSMg01no159_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:26 2005
(324 letters)
>mm_chr1_82103091_82103814
Length = 724
Score = 619 bits (320), Expect = 0.0
Identities = 320/320 (100%)
Strand = Plus / Plus
Query: 5 gaattcacatcccaaatgtggctatttttaatggcactaattctaaaattctagtctctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatcccaaatgtggctatttttaatggcactaattctaaaattctagtctctg 264
Query: 65 tccctcctgtacatgtaactactacaaacagggaaaaccaatggctctttttatagcatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccctcctgtacatgtaactactacaaacagggaaaaccaatggctctttttatagcatc 324
Query: 125 ttcacataaaaatctccacaccattcagatgactgatgtcagcacagtgggtgaggggca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcacataaaaatctccacaccattcagatgactgatgtcagcacagtgggtgaggggca 384
Query: 185 tgaataggcattgggaaatccctgcgaatccatcatcctgagagacagcacagtgcccac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgaataggcattgggaaatccctgcgaatccatcatcctgagagacagcacagtgcccac 444
Query: 245 cgtgactccagagagactgaaatgaaatatgccatcggctctccagaggttaatcgatca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cgtgactccagagagactgaaatgaaatatgccatcggctctccagaggttaatcgatca 504
Query: 305 tacttctggtgctacttggt 324
||||||||||||||||||||
Sbjct: 505 tacttctggtgctacttggt 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_k15.g1 MSMg01no159_k15.g1 CHROMAT_FILE:
MSMg01no159_k15.g1 PHD_FILE: MSMg01no159_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:26 2005
(289 letters)
>mm_chr1_82210489_82211178
Length = 690
Score = 518 bits (268), Expect = e-151
Identities = 280/284 (98%), Gaps = 1/284 (0%)
Strand = Plus / Minus
Query: 1 tttgtacagagggagtctttctctactctgccttgcagcaagtc-aacactttttttccc 59
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 484 tttgtacagagggagtctttctctactctgccttgcagcaagtcaaacacttttttcccc 425
Query: 60 cctcagaggtgaaagaggaagaggaaggaagaccttgcaacaggaatctcaccaaatcaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cctcagaggtgaaagaggaagaggaaggaagaccttgcaacaggaatctcaccaaatcaa 365
Query: 120 tagcttgacaggctgcaaaggtattttcttctcaagttgaggattgcagcaaatacttag 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tagcttgacaggctgcaaaggtattttcttctcaagttgaggattgcagcaaatacttaa 305
Query: 180 tggttaagttctttctcacctgtgactcctgtggactgaattcattcattcttttcacag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tggttaagttctttctcacctgtgactcctgtggactgaattcattcattcttttcacag 245
Query: 240 gctacagtcagcacttagttcagtgtgtctcgatctccagagct 283
||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 244 gctacagtcagcacttagtgcagtgtgtctcgatctccagagct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
