Query= MSMg01no159_n18.b1 MSMg01no159_n18.b1 CHROMAT_FILE:
MSMg01no159_n18.b1 PHD_FILE: MSMg01no159_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:39 2005
(318 letters)
>mm_chr1_115044083_115044800
Length = 718
Score = 292 bits (151), Expect = 2e-83
Identities = 154/155 (99%)
Strand = Plus / Plus
Query: 61 tccaacaaggccacactccctgtggtaaacatattcaaacatcatacaaactatgacaaa 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaacacggccacactccctgtggtaaacatattcaaacatcatacaaactatgacaaa 320
Query: 121 aacaggtacaatgaagtggaattctattttcagacatgaacacattgactttggaaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaggtacaatgaagtggaattctattttcagacatgaacacattgactttggaaattg 380
Query: 181 tagtagaaatattttgaatattgagctggaaaagc 215
|||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtagaaatattttgaatattgagctggaaaagc 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_n18.g1 MSMg01no159_n18.g1 CHROMAT_FILE:
MSMg01no159_n18.g1 PHD_FILE: MSMg01no159_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:39 2005
(291 letters)
>mm_chr1_115139476_115140166
Length = 691
Score = 282 bits (146), Expect = 1e-80
Identities = 167/174 (95%), Gaps = 2/174 (1%)
Strand = Plus / Minus
Query: 1 atttatcattatatatgtgtgcaggggcaactttttgggattgaataatctgtcagggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atttatcattatatatgtgtgcaggggcaactttttgggattgaataatctgtcagggtg 314
Query: 61 atggacttgagagaagattgactgcctttttctata-gccattaattgcttatagttctt 119
|| ||||| |||||||||||| |||||||||||||| | |||||||||||||||||||||
Sbjct: 313 attgactttagagaagattgattgcctttttctatacg-cattaattgcttatagttctt 255
Query: 120 caaaaatttgtggggtctagtgagagttcttccatttgtgttgttatactatct 173
||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 254 caaaaatttgtggggcctagtgagagttcttccatttgtgttgttaaactatct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
