Query= MSMg01no161_a16.b1 MSMg01no161_a16.b1 CHROMAT_FILE:
MSMg01no161_a16.b1 PHD_FILE: MSMg01no161_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:12 2005
(374 letters)
>mm_chr1_38120171_38120949
Length = 779
Score = 609 bits (315), Expect = e-179
Identities = 360/379 (94%), Gaps = 9/379 (2%)
Strand = Plus / Plus
Query: 1 gtggttaagaacattgactgttcttctgaaggtcctgagttcaaatcccagcaaccacat 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 203 gtggttaagaacattgactgttcttcagaaggtcctgagttcaaatcccagcaaccacat 262
Query: 61 ggtggctcacaaccatccgtaatgagatctgacaccctcttctggtgtgtctgaagacag 120
|||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 263 ggtgtctcacaaccatccataatgagatctgacgccctcttctggtgtgtctgaagacag 322
Query: 121 tgacagtgtacttacatataataataaatctttaaaacacacacacagagtaaagaattt 180
||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||
Sbjct: 323 tgacagtgtacttacatataataataaatctttaaaacacacacacaca---aagacttt 379
Query: 181 gttatgatctgaacctgcaggacagacacaaacactacagagatcagaatggaactgtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gttatgatctgaacctgcaggacagacacaaacactacagagatcagaatggaactgtgc 439
Query: 241 tgagatgctgatgcctacagacatccatgatggcttccccacatttactctgaaccacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgagatgctgatgcctacagacatccatgatggcttccccacatttactctgaaccacaa 499
Query: 301 caggaactgatctcattcaatgctatgtac--ga----ataacggaaagtcatctgcata 354
||||||||||||||||||||||| ||| || || ||||||||| ||| ||||||||
Sbjct: 500 caggaactgatctcattcaatgcaatgcaccagagttcataacggaacgtcgtctgcata 559
Query: 355 aaaaagaaaccagggctca 373
|||||||||||||||||||
Sbjct: 560 aaaaagaaaccagggctca 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 779
Length adjustment: 9
Effective length of query: 365
Effective length of database: 770
Effective search space: 281050
Effective search space used: 281050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_a16.g1 MSMg01no161_a16.g1 CHROMAT_FILE:
MSMg01no161_a16.g1 PHD_FILE: MSMg01no161_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:12 2005
(383 letters)
>mm_chr1_38242557_38243339
Length = 783
Score = 694 bits (359), Expect = 0.0
Identities = 374/379 (98%)
Strand = Plus / Minus
Query: 1 caagtggtatgtgccctcagcaggttccctgagctctaggtctaatctgtgagatggaag 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 caagtggtgtgtgccctcagcaggttccctgagctctaggtctaatctgtgagatggaag 520
Query: 61 agcaaatggaatctcagatggcctaaccgcaagggagacacaagatgatcttgagccgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 agcaaatggaatctcagatggcctaaccgcaagggagacacaagatgatcttgagccgtt 460
Query: 121 tgacgtgatttcctcgggagtttgaggtgctagaagagatggatcgggttatcctgggcg 180
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 459 tgacgtgatttcctcgggagtttgaggtgctagaagaggtggatcgggttatactgggcg 400
Query: 181 ccttgtgattgtaacacattcctgatctgagctggggaagaattacccgtgtcaagcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ccttgtgattgtaacacattcctgatctgagctggggaagaattacccgtgtcaagcacc 340
Query: 241 aggaaagaatgagtctcaggaaatgctaaatatgcccttttctttattgaagtaccgtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aggaaagaatgagtctcaggaaatgctaaatatgcccttttctttattgaagtaccgtga 280
Query: 301 tgagattaataaattgacggtgattaataattattgttggaatatatgtaggttataaac 360
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 279 tgagattaataaattgacggtgattaataattaatgttggaatatatgtaggttataaat 220
Query: 361 aattatacaaaacgttgta 379
|||||||||||||||||||
Sbjct: 219 aattatacaaaacgttgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
