Query= MSMg01no161_c22.b1 MSMg01no161_c22.b1 CHROMAT_FILE:
MSMg01no161_c22.b1 PHD_FILE: MSMg01no161_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:30 2005
(384 letters)
>mm_chr1_110150162_110150948
Length = 787
Score = 685 bits (354), Expect = 0.0
Identities = 375/384 (97%), Gaps = 5/384 (1%)
Strand = Plus / Plus
Query: 1 gctttataggattctacaacagtaatgaaaaaaaaaaaaaaa----cagaggaaggaaag 56
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 gctttataggattctacaacagtaatgaaaaaaaaaaaaaaaaaaacagaggaaggaaag 260
Query: 57 aattaattgtattttttgtccattttattctttacattcacaaaattaatgttgataatt 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattaattgtattttttgtccattttattctttacattcacaaaattaatgttgataatt 320
Query: 117 cttttctagataatttaaattacctaaagctaaactctttaaggaataatttggtttaag 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttttctagataatttaaattacctaaagctaaactctttaaggaataatttggtttaag 380
Query: 177 aaaaaatttctaattaaaataagggctgcttagctttcattctcagacaaaaacaaaaag 236
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaa-tttctaattaaaataagggctgcttagctttcattctcagacaaaaacaaaaag 439
Query: 237 tatccaaaattcatactttattgattctggatagtttgttctaaaatgagaaacatgttt 296
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 440 tatccaaaattcatactttattgattctggatagtttcttctaaaatgagaaacaggttt 499
Query: 297 cttcaatatccacattcatacttcctttatctctccttctcttatctacatttcctgcaa 356
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 500 cttcaatatccacattcatacatcctttgtctctccttctcttatctacatttcctgcaa 559
Query: 357 tttacttggcatggtaatgctttt 380
||||||||||||||||||||||||
Sbjct: 560 tttacttggcatggtaatgctttt 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 787
Length adjustment: 9
Effective length of query: 375
Effective length of database: 778
Effective search space: 291750
Effective search space used: 291750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_c22.g1 MSMg01no161_c22.g1 CHROMAT_FILE:
MSMg01no161_c22.g1 PHD_FILE: MSMg01no161_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:30 2005
(222 letters)
>mm_chr1_110283952_110284573
Length = 622
Score = 424 bits (219), Expect = e-123
Identities = 222/223 (99%), Gaps = 1/223 (0%)
Strand = Plus / Minus
Query: 1 tctaggggcatcccattatgagagtatgagggggctagaaactgttactggggaggcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tctaggggcatcccattatgagagtatgagggggctagaaactgttactggggaggcctg 485
Query: 61 gagacttgcttgcccattgtccttgcttcaggcc-gatgagcggttgaaggctggagcct 119
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 484 gagacttgcttgcccattgtccttgcttcaggccagatgagcggttgaaggctggagcct 425
Query: 120 ggttttttgtttgtttggttgttgttgttgtttgtttgttgtttctactaataattgact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ggttttttgtttgtttggttgttgttgttgtttgtttgttgtttctactaataattgact 365
Query: 180 tacctgggcttctctggatttgccaatttcaaatctgtcatgg 222
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tacctgggcttctctggatttgccaatttcaaatctgtcatgg 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
