MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-161D07
Chromosome	1 (Build37)
Map Location	133,870,336 - 133,870,617
singlet/doublet	singlet
Overlap gene	Slc45a3
Upstream gene	Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826, LOC100042821, 2700049P18Rik, Avpr1b, LOC667238, Ctse, 5430435G22Rik, Slc26a9, 4732466D17Rik, Slc41a1, Rab7l1, Nucks1
Downstream gene	Elk4, Mfsd4, Pctk3, LOC100042221, Lemd1, EG638532, Klhdc8a, Nuak2, Tmcc2, Ripk5, Rbbp5, Tmem81, Cntn2, Nfasc, Lrrn2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Il10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16153 MGI:96537
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mapkapk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17164 MGI:109298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dyrk3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226419 MGI:1330300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lgtn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16865 MGI:109342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rassf5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54354 MGI:1926375
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ikbke (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56489 MGI:1929612
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srgap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14270 MGI:109605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042826 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100042821 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042821
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	2700049P18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108900 MGI:1919669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Avpr1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26361 MGI:1347010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667238 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 15 Proteins pseudo : _no_value

name	Ctse (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13034 MGI:107361
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5430435G22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226421 MGI:2442295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc26a9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320718 MGI:2444594
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4732466D17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212933 MGI:2442939
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc41a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98396 MGI:2444823
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab7l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226422 MGI:2385107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nucks1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98415 MGI:1934811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc45a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212980 MGI:1922082
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Elk4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13714 MGI:102853
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mfsd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213006 MGI:2442786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pctk3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18557 MGI:97518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042221 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042221
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Lemd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213409 MGI:1922403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG638532 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:638532 MGI:3646637
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Klhdc8a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213417 MGI:2442630
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nuak2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74137 MGI:1921387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmcc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68875 MGI:1916125
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ripk5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213452 MGI:1925064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbbp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213464 MGI:1918367
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem81 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74626 MGI:1921876
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cntn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21367 MGI:104518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nfasc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269116 MGI:104753
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16980 MGI:106037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754317 GeneID:16153 MGI:96537
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 10 transcript_id : NM_010548.1

name	Mapkapk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45544579 GeneID:17164 MGI:109298
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAP kinase-activated protein kinase 2 transcript_id : NM_008551.1

name	Dyrk3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130152 GeneID:226419 MGI:1330300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 transcript_id : NM_145508.2

name	Lgtn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350503 GeneID:16865 MGI:109342
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ligatin transcript_id : NM_010709.2

name	Rassf5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803301 GeneID:54354 MGI:1926375
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ras association (RalGDS/AF-6) domain family 5 transcript_id : NM_018750.3

name	Ikbke (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379783 GeneID:56489 MGI:1929612
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inhibitor of kappaB kinase epsilon transcript_id : NM_019777.3

name	Srgap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486599 GeneID:14270 MGI:109605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLIT-ROBO Rho GTPase activating protein 2 transcript_id : NM_001081011.1

name	LOC100042826 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234302 GeneID:100042826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : similar to pORF1 transcript_id : XM_001479399.1

name	2700049P18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341750 GeneID:108900 MGI:1919669
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700049P18 gene transcript_id : NM_175382.2

name	Avpr1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61675709 GeneID:26361 MGI:1347010
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arginine vasopressin receptor 1B transcript_id : NM_011924.2

name	Ctse (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982440 GeneID:13034 MGI:107361
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin E transcript_id : NM_007799.2

name	5430435G22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134031992 GeneID:226421 MGI:2442295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5430435G22 gene transcript_id : NM_145509.2

name	Slc26a9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802673 GeneID:320718 MGI:2444594
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 26, member 9 transcript_id : NM_177243.3

name	4732466D17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375855 GeneID:212933 MGI:2442939
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4732466D17 gene transcript_id : NM_178079.2

name	Slc41a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67514554 GeneID:98396 MGI:2444823
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 41, member 1 transcript_id : NM_173865.2

name	Rab7l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450114 GeneID:226422 MGI:2385107
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB7, member RAS oncogene family-like 1 transcript_id : NM_144875.1

name	Nucks1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341542 GeneID:98415 MGI:1934811
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear casein kinase and cyclin-dependent kinase substrate 1 transcript_id : NM_175294.2

name	Slc45a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122420 GeneID:212980 MGI:1922082
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 45, member 3 transcript_id : NM_145977.1

name	Elk4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679632 GeneID:13714 MGI:102853
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELK4, member of ETS oncogene family transcript_id : NM_007923.1

name	Mfsd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369923 GeneID:213006 MGI:2442786
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : major facilitator superfamily domain containing 4 transcript_id : NM_172510.2

name	Pctk3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679232 GeneID:18557 MGI:97518
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PCTAIRE-motif protein kinase 3 transcript_id : NM_008795.1

name	LOC100042221 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149234255 GeneID:100042221
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001477751.1

name	Lemd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115311552 GeneID:213409 MGI:1922403
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LEM domain containing 1 transcript_id : NM_001033250.3

name	EG638532 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363947 GeneID:638532 MGI:3646637
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG638532 transcript_id : XM_914588.2

name	Klhdc8a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363055 GeneID:213417 MGI:2442630
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch domain containing 8A transcript_id : NM_144810.3

name	Nuak2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891701 GeneID:74137 MGI:1921387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NUAK family, SNF1-like kinase, 2 transcript_id : NM_028778.3

name	Tmcc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341188 GeneID:68875 MGI:1916125
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane and coiled-coil domains 2 transcript_id : NM_178874.2

name	Ripk5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124301222 GeneID:213452 MGI:1925064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : receptor interacting protein kinase 5 transcript_id : NM_172516.4

name	Rbbp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27369713 GeneID:213464 MGI:1918367
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoblastoma binding protein 5 transcript_id : NM_172517.1

name	Tmem81 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361444 GeneID:74626 MGI:1921876
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 81 transcript_id : NM_029025.2

name	Cntn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124248523 GeneID:21367 MGI:104518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin 2 transcript_id : NM_177129.5

name	Nfasc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130561 GeneID:269116 MGI:104753
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neurofascin transcript_id : NM_182716.3

name	Lrrn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922709 GeneID:16980 MGI:106037
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat protein 2, neuronal transcript_id : NM_010732.2

name	Il10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754318 CCDS:CCDS15265.1 GeneID:16153 MGI:96537
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] [Evidence ISS]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005125 - cytokine activity [Evidence IDA]; GO:0005141 - interleukin-10 receptor binding [Evidence ISS] GO_process : GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0030183 - B cell differentiation [Evidence ISS]; GO:0042100 - B cell proliferation [Evidence ISS]; GO:0007253 - cytoplasmic sequestering of NF-kappaB [Evidence ISS]; GO:0042742 - defense response to bacterium [Evidence IDA]; GO:0030097 - hemopoiesis [Evidence ISS]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence ISS]; GO:0045077 - negative regulation of interferon-gamma biosynthesis [Evidence ISS]; GO:0045347 - negative regulation of MHC class II biosynthesis [Evidence ISS]; GO:0045019 - negative regulation of nitric oxide biosynthesis [Evidence ISS]; GO:0042130 - negative regulation of T cell proliferation [Evidence ISS]; GO:0045348 - positive regulation of MHC class II biosynthesis [Evidence IDA]; GO:0045191 - regulation of isotype switching [Evidence ISS]; GO:0042092 - T-helper 2 type immune response [Evidence ISS] codon_start : 1 note : cytokine synthesis inhibitory factor product : interleukin 10 protein_id : NP_034678.1

name	Mapkapk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45544580 CCDS:CCDS15266.1 GeneID:17164 MGI:109298
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0048255 - mRNA stabilization [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : MAPKAP kinase 2 product : MAP kinase-activated protein kinase 2 protein_id : NP_032577.1

name	Dyrk3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704000 CCDS:CCDS15267.1 GeneID:226419 MGI:1330300
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 protein_id : NP_663483.1

name	Lgtn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859574 GeneID:16865 MGI:109342
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA] GO_process : GO:0006413 - translational initiation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ligatin protein_id : NP_034839.1

name	Rassf5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60097929 CCDS:CCDS15268.1 GeneID:54354 MGI:1926375
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0042802 - identical protein binding [Evidence IPI]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : Rap1-binding protein; novel ras effector 1 product : Ras association (RalGDS/AF-6) domain family 5 protein_id : NP_061220.2

name	Ikbke (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981053 CCDS:CCDS15269.1 GeneID:56489 MGI:1929612
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008384 - IkappaB kinase activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : inducible IKappaB kinase; inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon product : inhibitor of kappaB kinase epsilon protein_id : NP_062751.2

name	Srgap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486600 GeneID:14270 MGI:109605
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0051301 - cell division [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : formin binding protein 2 product : SLIT-ROBO Rho GTPase activating protein 2 protein_id : NP_001074480.1

name	LOC100042826 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234303 GeneID:100042826
definition	codon_start : 1 product : similar to pORF1 protein_id : XP_001479449.1

name	2700049P18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425090 CCDS:CCDS15270.1 GeneID:108900 MGI:1919669
definition	codon_start : 1 product : hypothetical protein LOC108900 protein_id : NP_780591.1

name	Avpr1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753152 GeneID:26361 MGI:1347010
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : V3/V1b pituitary vasopressin receptor; arginine vasopressin type 1b receptor product : arginine vasopressin receptor 1B protein_id : NP_036054.1

name	Ctse (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681081 CCDS:CCDS15271.1 GeneID:13034 MGI:107361
definition	GO_component : GO:0005768 - endosome [Evidence IDA]; GO:0019028 - viral capsid [Evidence IEA]; GO:0019031 - viral envelope [Evidence IEA] GO_function : GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]; GO:0004193 - cathepsin E activity [Evidence IEA] [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008130 - neutrophil collagenase activity [Evidence IEA]; GO:0004194 - pepsin A activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0019886 - antigen processing and presentation of exogenous peptide antigen via MHC class II [Evidence IDA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cathepsin E preproprotein protein_id : NP_031825.1

name	5430435G22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704002 CCDS:CCDS15272.1 GeneID:226421 MGI:2442295
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC226421 protein_id : NP_663484.1

name	Slc26a9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893301 CCDS:CCDS15273.1 GeneID:320718 MGI:2444594
definition	GO_function : GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : SLC26A9 anion transporter/exchanger; anion transporter/exchanger-9 product : solute carrier family 26, member 9 protein_id : NP_796217.1

name	4732466D17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113374119 CCDS:CCDS15274.1 GeneID:212933 MGI:2442939
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC212933 protein_id : NP_835180.1

name	Slc41a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33238870 CCDS:CCDS15275.1 GeneID:98396 MGI:2444823
definition	GO_function : GO:0008324 - cation transporter activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA] codon_start : 1 product : solute carrier family 41, member 1 protein_id : NP_776290.1

name	Rab7l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450115 CCDS:CCDS15276.1 GeneID:226422 MGI:2385107
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : RAB7, member RAS oncogene family-like 1 protein_id : NP_659124.1

name	Nucks1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424964 GeneID:98415 MGI:1934811
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] codon_start : 1 exception : unclassified translation discrepancy product : nuclear, casein kinase and cyclin-dependent kinase substrate protein_id : NP_780503.1

name	Slc45a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122421 CCDS:CCDS15278.1 GeneID:212980 MGI:1922082
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : prostate cancer associated protein 6 protein_id : NP_666089.1

name	Elk4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679633 GeneID:13714 MGI:102853
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : ELK4, member of ETS oncogene family protein_id : NP_031949.1

name	Mfsd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369708 CCDS:CCDS15280.1 GeneID:213006 MGI:2442786
definition	codon_start : 1 product : major facilitator superfamily domain containing 4 protein_id : NP_766098.1

name	Pctk3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679233 CCDS:CCDS15281.1 GeneID:18557 MGI:97518
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] citation : [PUBMED 1437147] codon_start : 1 product : PCTAIRE-motif protein kinase 3 protein_id : NP_032821.1

name	LOC100042221 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149234256 GeneID:100042221
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477801.1

name	Lemd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680919 GeneID:213409 MGI:1922403
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005635 - nuclear envelope [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006541 - glutamine metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : LEM domain containing 1 protein_id : NP_001028422.2

name	EG638532 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363948 GeneID:638532 MGI:3646637
definition	codon_start : 1 product : hypothetical protein protein_id : XP_919681.2

name	Klhdc8a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450177 GeneID:213417 MGI:2442630
definition	codon_start : 1 product : kelch domain containing 8A protein_id : NP_659059.1

name	Nuak2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229182 CCDS:CCDS15283.1 GeneID:74137 MGI:1921387
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence ISS]; GO:0006915 - apoptosis [Evidence IEA]; GO:0042149 - cellular response to glucose starvation [Evidence ISS]; GO:0043066 - negative regulation of apoptosis [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] [Evidence ISS] codon_start : 1 note : SNF1/AMP-activated protein kinase product : NUAK family, SNF1-like kinase, 2 protein_id : NP_083054.1

name	Tmcc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725710 CCDS:CCDS15284.1 GeneID:68875 MGI:1916125
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : transmembrane and coiled-coil domains 2 protein_id : NP_849205.1

name	Ripk5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40556610 CCDS:CCDS15285.1 GeneID:213452 MGI:1925064
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : dusty protein kinase product : receptor interacting protein kinase 5 protein_id : NP_766104.2

name	Rbbp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369714 CCDS:CCDS15286.1 GeneID:213464 MGI:1918367
definition	GO_component : GO:0035097 - histone methyltransferase complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS] codon_start : 1 exception : mismatches in translation product : retinoblastoma binding protein 5 protein_id : NP_766105.1

name	Tmem81 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312826 CCDS:CCDS15287.1 GeneID:74626 MGI:1921876
definition	codon_start : 1 product : hypothetical protein LOC74626 protein_id : NP_083301.1

name	Cntn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54607084 CCDS:CCDS15288.1 GeneID:21367 MGI:104518
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0001764 - neuron migration [Evidence IMP] codon_start : 1 note : axonin; transiently-expressed axonal glycoprotein product : contactin 2 protein_id : NP_796103.2

name	Nfasc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:35215309 GeneID:269116 MGI:104753
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0050808 - synapse organization and biogenesis [Evidence IMP] codon_start : 1 product : neurofascin protein_id : NP_874385.1

name	Lrrn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47777289 CCDS:CCDS15289.1 GeneID:16980 MGI:106037
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat protein 2, neuronal protein_id : NP_034862.1

name	LOC100042821 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042821
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:273626
definition	standard_name : PMC96371P1

name	(CDS detail)
type	STS
link
xref	UniSTS:273123
definition	standard_name : PMC321611P1

name	(CDS detail)
type	STS
link
xref	UniSTS:178459
definition	standard_name : M37897

name	(CDS detail)
type	STS
link
xref	UniSTS:223116
definition	standard_name : RH141120

name	(CDS detail)
type	STS
link
xref	UniSTS:158846
definition	standard_name : AA960234

name	(CDS detail)
type	STS
link
xref	UniSTS:167283
definition	standard_name : D1Ertd5e

name	(CDS detail)
type	STS
link
xref	UniSTS:178462
definition	standard_name : AU042887

name	(CDS detail)
type	STS
link
xref	UniSTS:239150
definition	standard_name : Nore1-pending

name	(CDS detail)
type	STS
link
xref	UniSTS:128531
definition	standard_name : D1Mit193

name	(CDS detail)
type	STS
link
xref	UniSTS:178461
definition	standard_name : AW558201

name	(CDS detail)
type	STS
link
xref	UniSTS:213306
definition	standard_name : RH130018

name	(CDS detail)
type	STS
link
xref	UniSTS:165098
definition	standard_name : AI448945

name	(CDS detail)
type	STS
link
xref	UniSTS:207205
definition	standard_name : BB210543

name	(CDS detail)
type	STS
link
xref	UniSTS:163261
definition	standard_name : X97399

name	(CDS detail)
type	STS
link
xref	UniSTS:158848
definition	standard_name : AI098026

name	(CDS detail)
type	STS
link
xref	UniSTS:234209
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:164127
definition	standard_name : AI573938

name	(CDS detail)
type	STS
link
xref	UniSTS:212946
definition	standard_name : RH129649

name	(CDS detail)
type	STS
link
xref	UniSTS:158850
definition	standard_name : 35.MMHAP31FLD5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:178463
definition	standard_name : AI647518

name	(CDS detail)
type	STS
link
xref	UniSTS:6910
definition	standard_name : D1S2379

name	(CDS detail)
type	STS
link
xref	UniSTS:163069
definition	standard_name : RH126361

name	(CDS detail)
type	STS
link
xref	UniSTS:128865
definition	standard_name : D1Mit497

name	(CDS detail)
type	STS
link
xref	UniSTS:158849
definition	standard_name : AU023994

name	(CDS detail)
type	STS
link
xref	UniSTS:185451
definition	standard_name : BB162516

name	(CDS detail)
type	STS
link
xref	UniSTS:165099
definition	standard_name : AI850289

name	(CDS detail)
type	STS
link
xref	UniSTS:161178
definition	standard_name : RH124356

name	(CDS detail)
type	STS
link
xref	UniSTS:163262
definition	standard_name : X69026

name	(CDS detail)
type	STS
link
xref	UniSTS:165100
definition	standard_name : AI428128

name	(CDS detail)
type	STS
link
xref	UniSTS:234389
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:215692
definition	standard_name : RH132409

name	(CDS detail)
type	STS
link
xref	UniSTS:236515
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234215
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:212772
definition	standard_name : RH129466

name	(CDS detail)
type	STS
link
xref	UniSTS:234214
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:165101
definition	standard_name : AI465369

name	(CDS detail)
type	STS
link
xref	UniSTS:231669
definition	standard_name : RH142422

name	(CDS detail)
type	STS
link
xref	UniSTS:215897
definition	standard_name : RH132614

name	(CDS detail)
type	STS
link
xref	UniSTS:234213
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234218
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:158851
definition	standard_name : MHAa21c6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:143908
definition	standard_name : Ms10j

name	(CDS detail)
type	STS
link
xref	UniSTS:224292
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:231620
definition	standard_name : RH142373

name	LOC667238 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234304 GeneID:667238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 15 Proteins product : similar to adaptor-related protein complex 1, sigma 3 subunit pseudo : _no_value transcript_id : XR_034191.1

clone name	MSMg01-371K18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-309B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488E24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-380B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041M11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-161D07.T7 (MSMg01no161_d07.b1)	MSMg01-161D07.TJ (MSMg01no161_d07.g1)
ACC	AG360669	AG360670
length	1,260	1,191
length of high quality (start - end)	282 (124 - 405)	---
definition	CHROMAT_FILE: MSMg01no161_d07.b1 PHD_FILE: MSMg01no161_d07.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:27:33 2005	CHROMAT_FILE: MSMg01no161_d07.g1 PHD_FILE: MSMg01no161_d07.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:27:33 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NCCGGTCCNNNNNNNGCAGTGGGCGCTAAGACTCCTAAGGGAGAGGATCC GCGGAATTCCTTGTGTAATTCTGGCCCCTTAAAGCTGGGCTCTCAGGAGT ACCTGCATCTCCAGACCTTAGTAGATATGAAAAGAGGGAGGGCGGACTTG AAATATAGGCATCTGGGACCTGCCTACCTTCCGCCCCACTCGTATCTATG AGTTGTGTGTGCCCCTGGTCCAGACCCCAGATACCAGGTAGAACATCTCT ATGGGTGGAGAGAAGCACTGTAGCTCAGAAGCTGTCTGGGTTGTAAGAGG ATGGAGATGGAATACTTGTGTTCCTGTTGTCCTGTGTCCTGTGAGCTCCC CATTCCTCCTCACAAAAGTGCTGGAGGACTGGGCCAGAGATGCCTGCAGG GAGGGATTTTTTGTGAGGTGACTGGACTAGTGAAGAACGCAGGACTTACA GAATGAGGGTTTTTTTCCCCCCCCGGTTGGGTCTGGCAAAGTCTCTTATT TGCTCAAGGAGGACCTGGTCCCTTAAACCCAGTGCAGGTGAGAGCCCAGT TCCTCCCAGACTGAGGGTGGAGAGTAGAGTGGCTACAAGTCCGTCACCCC AGAAGTCCGTCACTTCCTCTAGGCTGGGCAGCTTTCCCTCTGGATCACTA GAAAAAGGGGAGGAGCCAAGTTGAACCCAGAGTAGCCCAGCTAAAACTGA GGTCTGTCCGGTGCCTCCACCTCAGGACTGTGGGTCAGTATTTTATCTTC CTTTTTATGACACCCTTTTTTATAAGCCTCACCCTTTTTACAAAGTGTAG GAACTTTGGACAGGGGGCTCTCTGGTGCCCAGGTTTGTCTCCAGTCCCTT TTTTCCTAATCTTTTTGTTATCTTATTCTCTTATAGCCAATTTTGTTTGT GTAGCCCCTCCATGGTGTTTTTTGGTATTTAACTCCTGGCCTCTTTGTAA TAAATCCTGGGGTTTTTAATGCTGGTCAATTTCTTTTTTCCCTCAAGGTC CCTTTAGGTTGTATGTGTTTACCTTTACTTGTCTACTATTTTTCCGTTCC TTTAACTCTCATTATCCATTTTCCATTTTTATTTTTCCTTTCTTTGATCG TCTTCTCCATAGCTTTTTTTTTTGTTTACTTATATCTTCTATTCCTCTTC ACTACCTCTCTTATTTCTTTCTTAGTCAAATGTGTACTTGTTACTCTCCT TACTCTCTTCCTTTCAATTTTCTTTTTTTCTGTTCTTTTTCATTATTTGT GCTATGTCTT	NNAAGAGAAGGAGGCTGGGGCGCCXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXCCTTTTAAGGAGNANNNNANAANNNNANANANNNAN AANNCCCTTAAAGGGANCCAGGNNNCNGGGNNAAANAAANAAGNNAAANA AAANAANCAGGANAAAANNANNNANANANCAGANNNNNNAGAANAAAAGA GANNANGGGNAGGAGNCNGGAGAGNANNANNNNAGAAGNNANGGGNCANC AGAGCACCCCNCAGAGGNNAGGGGANACAGGACNCNAGGGNAAAGGAACG GCGGCAGGGGGGGAGAGCNGCCGGAGTATCAGAANCNCGGGGGNNNNCAA AGAGCGAGGGGNACGGNNGAGAAGNCNANGGGAGGCAAACNNCCNCTTTT TTTTTGCAAACCACNGACNANAAACCCCAGCCACCCCCAAAGCCCCTTAT TTTTTTTCCCCCCCCCCCAAAGAGNNNNANNNNGAAAAAAAAAAGAGGGA NNNNNNNNNNANNNNNNNAGNNNGNNNNNNNGANNNANNNNNGNNGNNAG GNNNNGNNGGNGNNNNGNNAAGNNAGGAGGGNGGNNGGNGNANGGNNGAA NNNANGGGGGAAGGNGGGAGANGGNNGGGGANGNAGNAGGGNAGAGGGNN AGNNNAGNANANANAAAGGNNAAGGNNNAGNNNNNAGNANGGNAAAAANN AAGNNGGGGGGNGAAGGNNGGNAANNNNAGGGNNNAGGAGGNGGAAGNNA GAAGGNNAGAAGNNNNAAAGAAAANNNGGGGAAAAGGAGGGGAGAAGAGG GAGGGAGGAAAAAANAAAAAGAAAAAGGAGGGGGAGAGGAAAGAGGAAAG AAGAAAAGAAGGGAGGAAAAAGAGGAGAAAAGGAGAGAGAAAGAAGAGAA AGAGAAAGAGGGAAAAAGAGGGAGAGGGAAAAAAGGAGGAGAGGAAAGGG GAAGAAAGAAAAGAAGAAGAGAAGGAAAGAGGGAGAGAAGGAGGAAAAAA GAGAGAGAAAAAGAGAAGAAGGGGAAGAGGAGAAAGAAAAAGGGAGAGGA AGGGAAAGAAGAGAGAAAAAGANAAGAGAGAAGAAGAAAAGNAGAAGGGG AGAGAAGGAGAAGAGGAAGGAAAGAGAAAAAAGAGGAGAGGAGAAAAAGG GAGGAAAGGAAAAGGAAAAAAGAGAAGAAAAGGAAAGAAGT
quality values	Open. Hide. 0 3 8 8 8 8 8 3 0 0 0 0 0 0 0 3 7 6 6 6 8 8 9 10 8 8 8 8 8 8 19 19 9 8 8 8 8 8 15 22 33 33 37 37 40 40 42 42 42 47 50 50 53 53 53 43 43 53 53 38 35 35 35 35 35 31 31 31 33 59 59 36 43 21 16 12 14 12 11 11 11 15 15 18 19 17 15 13 19 23 35 36 36 42 42 42 50 42 42 38 38 38 38 53 53 36 31 31 31 31 31 23 25 12 11 14 12 16 16 9 10 10 10 15 22 33 32 28 32 34 36 41 30 21 24 24 17 18 20 34 41 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 37 42 37 37 37 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 48 48 48 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 53 53 53 59 59 57 53 50 50 50 50 50 53 53 57 59 59 50 50 50 44 39 37 37 25 20 12 10 11 11 12 12 11 11 11 15 28 28 42 42 50 50 50 53 53 53 57 57 57 57 59 59 59 59 59 59 57 57 57 57 57 57 57 50 50 50 53 53 57 59 59 59 59 59 39 37 32 24 15 11 12 11 9 9 11 14 12 12 18 14 13 17 21 12 12 9 11 9 11 23 29 59 59 59 59 59 59 59 47 39 37 33 37 39 34 30 25 21 21 14 14 12 12 11 11 12 12 14 13 17 27 32 37 41 48 48 48 57 59 57 59 59 59 59 59 59 57 57 57 57 57 57 59 48 57 48 48 48 54 54 46 46 43 43 43 46 46 57 59 57 57 57 54 57 57 59 59 59 48 47 47 39 43 39 39 36 43 43 43 43 43 44 43 43 40 37 37 37 37 41 41 41 37 35 41 37 37 30 30 30 39 39 48 48 47 47 43 46 46 47 59 43 48 43 43 43 43 43 43 43 47 43 43 43 40 43 40 43 43 43 36 36 36 36 37 39 35 39 35 44 44 54 57 57 46 46 46 54 54 57 54 54 54 54 48 57 43 48 48 42 42 36 36 43 43 43 47 47 47 47 48 48 42 47 39 39 37 37 30 37 37 41 41 47 29 21 19 15 15 17 32 36 39 34 37 30 28 20 23 27 37 37 37 37 39 41 41 41 41 39 39 30 25 25 39 39 39 39 40 40 40 43 39 35 25 30 26 33 33 37 37 40 39 39 37 37 29 31 37 37 37 36 35 35 39 39 48 37 28 14 14 12 19 12 13 13 21 24 43 43 27 23 8 8 8 22 22 35 36 37 37 35 35 35 39 37 32 37 31 32 32 32 33 30 23 21 19 17 8 12 12 17 17 17 36 36 41 30 27 10 10 10 10 14 16 28 30 28 19 19 15 16 21 15 15 12 11 8 8 8 8 13 12 14 13 22 10 13 9 9 9 8 10 13 13 10 11 16 15 11 11 12 12 10 10 10 15 14 9 9 11 14 15 9 13 9 9 9 9 10 10 10 10 9 9 19 18 13 13 9 8 6 6 7 7 6 8 8 8 8 6 6 8 8 10 12 8 10 11 12 8 8 8 7 6 6 8 8 8 9 10 11 11 11 11 13 11 11 8 8 8 8 7 6 6 6 10 8 8 6 6 8 8 8 6 6 6 8 8 12 12 10 12 19 19 15 10 9 9 9 15 10 10 8 10 8 9 9 10 10 8 8 6 7 10 8 10 9 10 8 8 8 8 8 8 10 10 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 13 15 10 12 12 9 10 9 10 10 11 10 10 10 8 8 6 6 8 6 7 10 8 10 10 11 9 9 8 8 8 8 8 8 11 12 10 12 12 12 11 11 12 12 12 10 10 8 7 6 8 6 6 12 8 9 9 8 8 8 8 8 6 6 8 10 10 8 9 6 7 8 10 8 8 9 9 8 8 8 6 6 8 8 8 8 8 8 8 11 14 13 15 8 8 8 8 10 10 10 8 8 8 8 8 8 9 10 10 10 6 6 6 9 9 9 10 10 10 10 8 8 8 10 10 8 6 6 8 10 19 23 22 32 15 10 8 8 8 8 6 8 6 6 6 6 9 8 8 6 6 8 9 7 10 8 8 6 6 8 6 8 8 8 8 8 8 8 6 6 8 8 6 6 8 8 8 8 11 19 8 9 6 8 8 6 6 8 6 6 6 8 10 8 8 8 8 8 8 11 9 9 9 12 11 11 11 9 9 8 8 8 8 8 8 6 9 9 9 10 9 9 10 12 8 8 8 8 10 6 6 6 6 8 8 6 6 8 10 18 16 16 8 8 8 6 6 8 8 6 6 8 8 9 10 12 12 11 10 10 9 10 9 9 9 9 9 11 11 8 8 7 10 9 9	Open. Hide. 0 0 3 6 6 6 6 8 8 6 7 8 8 8 8 6 6 7 7 14 19 17 9 9 10 9 16 16 28 21 21 10 10 10 22 19 28 28 28 35 47 35 35 35 37 37 42 36 38 38 53 50 50 50 50 50 50 42 42 47 27 25 9 9 9 12 9 8 10 8 8 9 9 9 9 3 0 3 0 0 0 0 3 0 3 3 0 0 0 0 3 0 3 0 3 0 0 0 3 0 3 3 0 0 3 7 7 7 6 6 6 8 8 8 8 3 0 3 27 27 27 3 0 0 0 3 0 3 6 3 0 0 3 27 3 0 3 27 3 0 3 25 3 0 0 3 27 3 0 3 27 27 3 0 3 3 0 3 7 7 7 3 0 3 29 29 3 0 0 3 0 0 0 3 0 3 0 3 0 3 6 6 3 0 0 0 0 0 0 3 23 25 3 0 3 29 27 59 59 27 27 3 0 0 3 0 3 6 3 0 3 17 27 27 3 0 3 0 3 9 23 27 27 3 0 3 0 0 3 0 0 0 0 3 25 25 29 3 0 0 3 0 3 9 3 0 3 3 0 3 23 23 47 41 41 47 44 27 27 3 0 3 25 25 25 25 3 0 0 3 14 7 7 7 3 0 3 25 25 47 27 27 3 0 3 0 3 7 7 3 0 3 14 7 9 9 9 19 59 24 24 9 9 9 9 19 23 24 9 9 9 9 9 9 19 27 29 3 0 3 14 7 8 7 6 6 9 9 9 12 11 23 23 3 0 3 0 3 7 7 7 7 3 0 0 0 0 3 29 29 44 47 47 44 23 19 9 9 7 7 3 0 3 7 7 3 0 0 3 27 27 27 29 3 0 3 0 3 0 3 25 25 39 41 42 47 59 27 27 3 0 0 3 3 0 3 8 8 11 13 13 14 25 18 16 11 11 28 33 59 59 29 29 3 0 3 27 3 0 3 0 3 29 29 59 47 39 34 32 28 28 37 37 59 59 30 25 17 17 12 25 12 12 9 9 7 8 7 7 7 16 16 23 23 19 17 18 15 15 19 23 23 23 35 30 17 12 9 6 6 6 6 9 3 0 0 0 0 3 0 0 0 0 3 9 9 10 15 19 26 29 21 16 8 8 6 6 6 8 3 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 3 3 0 0 0 3 0 0 0 0 0 0 0 3 3 0 0 0 3 0 0 0 0 0 3 0 0 3 0 0 3 27 3 0 0 0 0 3 0 0 3 3 0 3 0 0 0 0 3 0 0 3 27 3 0 0 3 25 25 39 25 17 3 0 3 3 0 0 3 3 0 3 0 3 0 3 3 0 0 3 27 3 0 0 0 3 0 3 27 29 19 9 9 7 7 3 0 3 7 7 15 15 3 0 3 3 0 0 3 27 23 23 3 0 3 0 3 3 0 3 27 27 3 0 3 17 14 7 7 3 0 0 3 3 0 0 0 3 3 0 3 0 3 0 3 0 3 17 7 7 3 0 0 3 7 7 3 0 0 0 3 3 0 0 0 0 0 3 3 0 3 0 3 3 0 3 6 7 7 3 0 0 3 25 3 0 0 3 7 7 7 7 3 0 3 6 6 7 3 0 0 3 3 0 3 3 0 0 0 0 3 7 7 3 0 0 0 3 19 15 17 12 3 0 3 13 13 12 3 0 0 3 27 19 19 19 3 0 0 3 23 23 27 3 0 0 0 0 3 10 10 7 7 7 7 3 0 0 0 3 6 6 6 6 6 6 6 7 6 6 6 12 13 13 11 11 11 16 11 8 8 8 8 10 17 19 16 9 9 9 6 8 8 19 17 3 0 3 9 11 10 11 10 10 10 10 16 10 8 8 8 8 8 10 9 8 8 8 8 6 6 8 19 12 12 12 8 8 8 8 9 9 9 8 8 10 8 8 8 8 11 10 8 8 8 8 10 13 12 13 9 9 11 11 10 8 8 6 6 8 15 16 12 8 10 8 8 8 8 6 6 8 6 7 8 8 8 8 8 8 10 9 9 10 9 10 10 10 10 6 6 8 8 10 10 11 11 20 14 12 10 10 8 8 8 8 7 6 8 8 15 12 15 10 11 11 12 17 8 8 8 8 8 8 8 8 8 7 7 8 8 9 9 8 8 8 8 8 6 8 9 9 9 10 16 14 11 11 16 15 14 14 12 15 13 9 9 9 8 8 6 6 8 8 9 8 8 6 6 8 8 8 6 6 8 8 8 8 8 8 8 6 6 8 8 8 10 9 12 17 14 13 10 10 9 9 10 8 8 8 9 9 12 11 11 12 13 22 12 11 9 9 10 12 12 19 23 25 11 11 14 19 13 10 11 11 10 10 10 12 13 19 14 10 10 10 10 12 14 26 19 17 10 8 8 8 8 8 10 15 15 10 10 3 0 3 9 9 9 7 8 8 13 12 8 11 11 11 11 11 10 12 3 0 3 13 15 8 8 8 8 6 6 8 12 6 6 8 8 8 8 8 8 11 8 10 9 15 15 28 21 21 15 10 9 8 8 6 6 8 12 10 8 6 6 10 8 6 7 12 10 10 8 9 9 9 9 11 9 9 8 8 8 8 8 8 9 10 10 8 8 6 7 12 10 14 13 12 12 9 9 9 8 8 6 8 8 8 8 8 15 13 10 10 10 8 13 10 9 9 11 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no161_d07.b1 MSMg01no161_d07.b1 CHROMAT_FILE:
MSMg01no161_d07.b1 PHD_FILE: MSMg01no161_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:33 2005
         (282 letters)



>mm_chr1_133870136_133870817
          Length = 682

 Score =  538 bits (278), Expect = e-157
 Identities = 281/282 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatatgaaaagagggagggcggacttgaaatataggcatctgggacctgcctaccttccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatatgaaaagagggagggcggacttgaaatataggcatctgggacctgcctaccttccg 260

                                                                       
Query: 61  ccccactcgtatctatgagttgtgtgtgcccctggtccagaccccagataccaggtagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccccactcgtatctatgagttgtgtgtgcccctggtccagaccccagataccaggtagaa 320

                                                                       
Query: 121 catctctatgggtggagagaagcactgtagctcagaagctgtctgggttgtaagaggatg 180
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 catctctatgggtggagagaagcactgtagctcagaagctgcctgggttgtaagaggatg 380

                                                                       
Query: 181 gagatggaatacttgtgttcctgttgtcctgtgtcctgtgagctccccattcctcctcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagatggaatacttgtgttcctgttgtcctgtgtcctgtgagctccccattcctcctcac 440

                                                     
Query: 241 aaaagtgctggaggactgggccagagatgcctgcagggaggg 282
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaagtgctggaggactgggccagagatgcctgcagggaggg 482


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space:   183729
Effective search space used:   183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information