Query= MSMg01no161_g07.b1 MSMg01no161_g07.b1 CHROMAT_FILE:
MSMg01no161_g07.b1 PHD_FILE: MSMg01no161_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:57 2005
(427 letters)
>mm_chr1_103297508_103298334
Length = 827
Score = 745 bits (385), Expect = 0.0
Identities = 403/409 (98%)
Strand = Plus / Plus
Query: 16 gaattcagagcttgataattggctaggctgataagcttcgaaccacatggaccatcttct 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattcagagcttgataattggctaggctgataagcttcgaaccacatggaccatcttct 275
Query: 76 cacccacactcaccaaacaccaggattatagacatgtgtcccaatgtccacttttgttta 135
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 276 cacccacactcaccaaacaccaggattatagacatgtgtccccatgtccacttttgttta 335
Query: 136 tatccatgctggagatctgaattaatgtttcatgctcatacaaaagacattttgtgtgtg 195
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tatccatgctggagatctgaaataatgtttcatgctcatacaaaagacattttgtgtgtg 395
Query: 196 tgaaggtacatcctcagaccaccagaccacaggcttattttaaaaatgtacatttcaatg 255
||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 396 tgaaggtacatcctcagaccaccaggccacaggtttattttaaaaatgtacatttcaata 455
Query: 256 ttatattctttagtatatttggcatggtcatgtgaggtagtggtatgtagtttgacaatg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttatattctttagtatatttggcatggtcatgtgaggtagtggtatgtagtttgacaatg 515
Query: 316 atggcagtttactaatctttcttttgatttttctttgttctgagactctcaaaacagaaa 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 atggcagtttactaatctttcttttgatttttctttgttctgagactctcaaaacagaaa 575
Query: 376 attgcccttttgaaaacagcttcagatacttttggaaacaatctattct 424
||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 576 attgcccttttgaaaacaggttcagatacttttggaaacaatctattct 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_g07.g1 MSMg01no161_g07.g1 CHROMAT_FILE:
MSMg01no161_g07.g1 PHD_FILE: MSMg01no161_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:57 2005
(388 letters)
>mm_chr1_103359472_103360264
Length = 793
Score = 600 bits (310), Expect = e-176
Identities = 372/394 (94%), Gaps = 7/394 (1%)
Strand = Plus / Minus
Query: 1 catgtcatgaaagattgaccgtaccaaactgtgag-tgtaccaagct-tcctatttcctg 58
||||||||||||||||||| |||||||||||||| |||| |||||| ||||||||||||
Sbjct: 593 catgtcatgaaagattgactataccaaactgtgagttgtaacaagctatcctatttcctg 534
Query: 59 aaatag-aaattgtcattgtttgtaacaacaagaaaacacctaagacactggaatcttca 117
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 533 aaatagaaaatt-tcattgtttgtaacaacaagaaaacacctaagacactggaagcttca 475
Query: 118 gtgaactgtgagagccttggcgagaggccaaaggagaatgagatggcagatgaagagcct 177
||||||||||||| |||| | ||||||||||| ||||||||||||||| |||||||||||
Sbjct: 474 gtgaactgtgagaaccttagagagaggccaaatgagaatgagatggcaaatgaagagcct 415
Query: 178 cagagaattctaggactgacgaagcaaagatgtgaaacacatttccttacaatgtaagcc 237
|||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||
Sbjct: 414 cagagaattctaggactgactaaggaaagatgtgaaacacatttcattacaatgtaagcc 355
Query: 238 tctatacaatacagcactgttgtcagcagggagtacagtcttctccagagaaacacacct 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tctatacaatacagcactgttgtcagcagggagtacagtcttctccagagaaacacacct 295
Query: 298 tgtaag---ctttgggtaggttttagggtaaagctgggggactactaaacccacacatta 354
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tgtaagcttctttgggtaggatttagggtaaagctgggggactactaaacccacacatta 235
Query: 355 ttttatgatggacaacatgtggcaaagaacactt 388
||||||||| ||| ||||||||||||||||||||
Sbjct: 234 ttttatgatagactacatgtggcaaagaacactt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 793
Length adjustment: 9
Effective length of query: 379
Effective length of database: 784
Effective search space: 297136
Effective search space used: 297136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
