| BAC end | BAC-end 1 | BAC-end 2 |
|---|
| end name | MSMg01-161H19.T7 (MSMg01no161_h19.b1) | MSMg01-161H19.TJ (MSMg01no161_h19.g1) |
|---|
| ACC | AG360877 | AG360878 |
|---|
| length | 1,215 | 1,258 |
|---|
length of high quality
(start - end) | 413 (28 - 440) | 314 (140 - 453) |
|---|
| definition | CHROMAT_FILE: MSMg01no161_h19.b1 PHD_FILE: MSMg01no161_h19.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:28:09 2005 | CHROMAT_FILE: MSMg01no161_h19.g1 PHD_FILE: MSMg01no161_h19.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:28:09 2005 |
|---|
| singlet/doublet | --- | singlet |
|---|
| BLAST hit | no hit data | unique |
|---|
| sequence | NNGGGCTATGGGCCTATAGACTCACTAAGGGAGAGGATCCGCGGAATTCT
CTGTTTAGCTCTGTTTCTCATTTTTTAATAGGGCTATTTGGTTCTCTGGA
GTCTAACTACTTGAATTCTTTGCCCATATTAGATAATAGCTCTCTATCAG
ATGTAGGATTGGTAAAGATATTTTCCCAATCTGTTGCTTGCCTGGGAGTG
GAGTTTCCTCTGAGTGTTATGGGACTGGCTCTGCCTTTTTGTCCTATTGA
CAGTGTCCTTTGCCTTACAGAAGTTTTGCAGTTTTATGAGCTCCCTTTTG
TCAGTTTTTGATCTTAGAGCATAAGCCATTGGTGTTCTGTTCAGGAACTT
TTCCCCTGTGCCCATGTGTTCAAGGTTTTTCCCTACTTTCGCTTCTTTTA
TATTCAGTGTATCTGGTTTTATGTGGAGGTCCTTAAGCCACGTATTTTTT
TTTTCCCCCCCCCCCGAGATAAGAAAGGTTTAATTAAAAAAGAGGGGGAT
GTTGATTGGTAATTGAATCAGGAGTATTTGTTGAAAATGTTGTCTTTTTC
CACTGGATGGTTTTAGCTCCTTTGTCTAAGATCTAGTGACCATAGGTATG
TGGTTTCATTTCGGGGTCTTCTGTGCTATTCCTTTGATCTTCCTGCCTGG
CCCTGTATCTTTACCGATGTATTTATACTACTATTGTTCTGTAATACAGT
TGGATTACTTGTATGTTTATTTTTCTAAAAGTTCTTTTATTGTTGTTATT
ATTTTTGTATTTTCTTGATTTTTTTTTTTTTTCTTTCATTTTTGTACAAC
ATCTTTCTTATCTCTTTATACTTTTTTTTCTTTTCTTTCTTTCTTTTCTT
TTTTCTTTTTTTTTTTTCTTTTTTTTTTTTGTTTTTTTTCTTCTCTTTTT
TTCTTTCTCTTTTTTTCATTTTTTCTTCTTTCTTTTATTTTTTTCTTTTT
CTTTCTCTTTTTTTTTATCTTCACTGTTTTTCTTTTTTTATTTTATTTTT
TTTTTTCTTCTCTTTTTTCTTTTTTTTTTATATCATTTTCCTCTTTTATT
TCTTACTTATTTTTTCTTATTTACTTTTTTTTTTTTTTTCCTTTTCACTC
TCTTATTTTTTTTTATCTTCCATCTTCCTACATTTTTTTTCTCTATTCCT
CTTATCTATTTTTCTCTTTTATCTTTTTCTTTTTTTCTTCTCTCTTTTAT
TCTCATAACTTCTTC
| NNNCCTTCAAGGAGNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTTTCAACCACTTGTAAAAACCCTGTTCTAT
TAAATAAAATGATTATTCTACTTTACCGCTCAAATAGAAGAGTTTAAAAT
GTAAATGCACTGTGAAGGTAAAACTTAGGGGAAATTTTGCATTTGTTCCC
ATGCAATCATTATACGGATACAAACAATTAAGCATTTATCCTTTTCATTA
CTGTTTCTAGTAATGTAGGAAGAAGGCAAAAAAGCAAACAGTCCCGTGTA
GTGCACATTTACTGAGCTTATAACAGGTGCTAAATCAGTGGTTCGCCAGC
TTGTATGTCTGTGACCTTTATTAAGAATTACAGTTCCTGTCCCAGCCTCT
GTTTAAGTACCTATGTATGATGAGAAAATTGTTATATAATACAGCTTATT
TTTTTTTACCCCCCCCCCCCTGATGTTCTCTAGTCTAGAGAAAAGAGTTA
CAATAGCTCCAGGAATGTTGGCTCTGACTCACTTACTTTTGCTGCCCACT
GATAGCTTGTGCATTGTGTTTTGAAATGTTGCACGGTGCTGCTCTTTCTC
CTAAAACTGTGGTCTGTGGGACAGCTTCCTCAGCACCGTGGGCTGTAAGA
AATGAAGAACATGAAGCTGCTCCTCACACCTACTGAATAAGAAAGACTCT
GTATTTTAACAGCACCTCTAGATGCCCCTGTGCATTTCTGGTGCCAGATG
ATGAAGGTGCTTTATGCTGCCGATATCTTCTGGTTGTTGTGGCAGATAGA
ACCTAACTCAGCGTCCCAGCTTGGGGTCTTTGTTTTTGTCGCTTAATTGT
TATAAAGGTTATATTTTTTTTTTAGTTTTCTTGTGTACCACTTTATTTTG
TCCATCTTTTATTTAGCCCTTTTATTCATCTTCTTGATTTATTTCTATTT
TTTATTTCCCCCTTTTAATCTTTTTCTTACTTTTTTTTTTTCTCTCTATC
TTTCTTTTCTTTTCTTTTATATTATTTCTCTTTTTTTTTATATTCCTTCT
ATTTTTCTTATTTTTATTCTTTTTGTCTTTCTGTTCTTACTTTTTATTTC
TTCTTTATCTTCTTCATTTCTTCTACTTCTATTCCTTTCTTTCTTTATTT
TTTATTCCTACTTTTCTTTTTTTCTTACTTATTTTTTATTTTTCTTTATT
TTTTCTTTCTTACTCTTTTTATCGTCTTTCTTCTCCTTCTTTACTTTTTA
TCTTTATC
|
|---|
| quality values | Open.Hide. 0 0 3 6 6 6 7 7 12 10 10 10 8 8 10 10 8 8 8 12 15 23 28 15 15 8 8 8 19 21 47 47 47 47 36 33 33 33 33 37 41 39 39 32 28 28 32 37 37 37
31 31 31 28 28 30 30 30 35 47 42 42 37 34 32 34 34 37 37 42 48 48 48 48 48 42 42 42 51 68 43 43 28 28 30 43 43 48 42 37 30 30 30 43 43 42 39 35 32 40
43 34 34 34 39 39 39 34 34 36 36 33 36 41 37 37 37 37 35 30 21 19 12 12 10 16 16 24 23 26 30 30 32 32 29 39 39 39 39 47 47 47 43 43 43 43 37 39 35 35
43 43 43 43 43 43 43 57 48 57 48 48 48 48 48 54 54 48 48 48 50 50 68 68 59 59 57 54 48 48 48 48 54 57 57 44 43 43 46 44 44 44 44 44 39 39 43 44 44 43
43 44 44 48 54 57 57 57 57 57 57 57 46 46 43 43 43 57 57 50 43 39 39 43 43 52 52 52 50 50 50 50 43 52 57 57 52 54 52 57 43 43 37 43 43 57 57 57 57 57
52 52 57 52 52 45 45 57 57 57 57 52 52 52 57 43 43 32 43 43 32 33 33 44 44 50 52 52 43 43 42 42 43 50 50 54 57 57 57 59 52 52 52 59 52 52 52 43 43 33
43 43 52 43 44 44 43 43 43 59 57 57 57 57 57 48 48 48 59 44 47 32 28 20 20 20 27 27 36 32 42 35 35 35 42 42 57 57 48 48 48 54 57 57 57 57 40 40 43 48
59 59 54 54 54 48 48 47 43 43 43 43 43 43 43 33 33 30 28 28 25 34 34 42 42 43 43 43 43 47 48 48 59 59 48 59 59 59 59 48 48 25 25 18 18 20 24 21 12 11
11 15 16 32 32 40 59 39 48 48 48 57 47 47 43 40 40 43 47 59 59 59 43 43 43 39 41 41 43 43 43 47 59 30 28 13 13 13 28 28 25 25 11 11 11 12 16 19 28 20
19 16 15 15 15 15 18 30 17 19 19 19 16 14 9 9 9 9 16 16 16 12 11 11 9 9 9 12 12 20 22 15 12 9 9 9 9 8 15 9 8 8 10 10 9 9 11 10 11 11
13 26 22 22 12 12 12 23 12 15 15 20 24 34 22 17 8 8 8 8 8 8 10 8 6 7 23 27 34 25 25 25 32 24 29 36 22 23 9 9 9 12 12 21 28 34 30 31 16 11
11 17 21 22 14 14 14 14 22 20 32 18 29 21 15 12 24 24 23 15 22 22 29 33 33 36 18 18 11 11 10 8 8 10 10 14 16 18 20 30 37 32 26 17 14 14 18 24 31 31
31 22 22 17 19 10 9 9 10 10 12 10 11 11 16 12 11 11 11 13 9 9 9 9 10 11 21 21 33 31 26 26 22 31 21 18 14 15 16 15 15 12 12 12 11 10 12 13 12 12
17 20 19 23 24 18 12 8 7 7 8 8 16 19 25 28 18 14 12 8 11 11 12 17 10 9 8 8 8 8 10 13 15 13 11 6 6 8 8 10 12 12 9 9 9 10 10 10 10 10
10 10 10 11 8 8 9 10 11 10 8 8 8 8 8 9 8 8 10 10 8 8 12 12 12 11 11 11 11 12 14 13 12 12 14 17 19 10 10 10 10 9 9 9 10 9 9 9 8 8
9 9 10 12 23 22 11 6 6 6 8 8 8 7 6 8 8 9 9 13 16 19 20 23 11 10 10 10 10 15 11 9 10 8 10 9 9 10 8 8 8 8 8 6 6 10 8 8 8 6
6 8 10 8 8 8 8 8 8 8 11 6 6 6 6 10 8 9 8 8 8 8 15 15 21 24 16 14 12 12 8 8 8 8 8 8 8 8 8 8 10 9 11 11 16 18 11 11 11 17
17 15 13 9 9 9 9 9 10 12 13 11 12 13 15 8 8 8 8 8 14 16 24 23 23 20 15 14 11 9 9 9 11 12 11 11 14 12 10 9 10 10 8 8 8 6 10 10 12 15
9 8 8 10 10 8 8 6 7 10 12 21 22 18 20 12 9 9 9 10 12 12 10 9 8 10 8 8 8 8 8 10 10 10 12 6 6 6 10 10 16 12 12 9 9 9 9 13 10 10
10 10 10 8 8 8 8 8 11 10 10 10 10 10 10 8 8 8 10 10 8 8 8 8 9 9 9 10 10 10 10 8 8 8 8 10 10 10 6 6 8 12 15 11 15 13 8 10 15 12
12 9 15 12 26 15 9 8 8 8 8 8 9 10 8 8 8 8 10 12 15 18 24 16 11 11 8 10 8 8 8 8 8 8 8 8 11 11 10 10 10 10 9 9 11 11 8 10 8 8
6 7 8 8 8 8 11 8 10 9 11 11 8 8 6 6 8 8 8 8 10 8 6 6 8 10 12 19 16 12 11 13 10 12 10 12 12 20 10 9 7 7 8 10 8 10 8 8 6 6
8 8 8 8 9 11 13 12 19 13 17 8 12 8 8 8 8 8 7 6 8 8 8 8 8 6 6 8 8 8 8 8 8 8 11 11 16 11 9 9 9 9 9 10 8 8 6 6 8 8
8 10 10 11 11 12 9 9 9 10 10 15 10 8 8 9 9 12 13 7 7 6 6 8 8 10 13 14 14 14 16 15 19 18 12 11 12 12 12 12 12 10 10 8 8 8 10 9 8 8
6 6 8 6 6 8 8 10 10 10 10 8 8 8 6 | Open.Hide. 0 0 0 3 6 6 6 6 6 6 6 6 6 3 0 3 7 7 11 8 8 8 15 9 9 9 9 13 12 19 19 19 9 10 10 21 19 29 22 24 22 33 29 35 34 36 33 37 37 37
37 37 36 57 57 57 57 57 57 57 43 43 43 43 37 40 32 46 43 43 43 42 31 28 31 31 37 41 30 36 23 24 14 14 14 33 44 48 48 42 42 36 36 29 30 30 32 37 37 42
42 39 39 39 43 43 40 39 35 37 37 39 39 39 39 32 32 31 31 31 31 24 27 11 10 10 7 7 8 15 18 30 21 21 23 19 23 24 18 18 20 32 32 42 42 42 43 37 28 28
20 32 30 29 19 23 23 28 24 20 25 17 25 25 42 42 42 37 37 37 36 30 35 32 30 36 25 44 44 28 28 28 44 44 47 59 41 32 28 36 36 42 42 43 43 44 44 44 44 42
35 33 27 38 44 37 37 42 39 43 50 44 48 44 44 44 44 48 46 46 43 44 44 57 57 52 52 52 50 43 38 38 23 32 32 43 43 37 37 37 52 52 57 50 52 52 52 43 43 43
24 24 29 43 43 52 52 43 36 28 34 34 20 23 20 38 36 20 20 23 27 27 29 44 43 52 52 57 59 59 59 57 52 52 52 59 57 57 43 43 35 35 35 44 43 32 32 32 32 32
20 20 20 38 41 42 43 43 50 50 43 43 43 43 33 35 35 42 43 44 57 57 54 48 47 43 41 41 35 42 42 43 47 48 44 42 44 28 28 28 41 30 42 42 46 57 39 39 32 32
30 36 28 36 31 39 41 41 32 41 28 30 30 37 42 48 57 54 43 43 39 30 25 18 18 20 32 32 47 43 43 43 43 39 32 37 32 32 30 39 39 59 59 34 34 18 24 16 18 12
13 11 12 12 20 18 34 34 39 39 39 43 39 39 35 47 35 39 39 40 39 39 43 43 43 59 43 59 43 43 39 59 59 59 59 59 59 59 40 40 40 43 43 37 34 28 34 28 30 21
20 17 23 22 17 17 11 11 11 12 16 24 26 26 24 17 23 17 24 23 31 31 39 39 36 59 43 48 48 47 34 32 23 23 23 15 15 10 6 6 8 8 15 10 11 11 10 11 11 12
12 24 29 34 41 23 23 28 34 34 46 43 37 37 37 37 39 39 40 43 33 32 28 34 37 39 35 39 39 43 43 43 39 42 43 43 43 46 44 48 43 43 43 43 48 47 42 39 35 35
39 28 28 25 36 36 37 42 35 37 37 44 44 39 42 35 35 35 59 59 57 47 54 57 59 44 44 43 47 46 43 43 43 36 44 30 32 30 41 30 41 41 28 41 41 59 42 43 41 39
35 39 47 59 43 43 39 39 35 32 30 39 28 28 31 20 18 24 18 20 23 30 30 30 30 30 37 32 31 34 34 31 39 39 40 37 39 35 30 28 28 34 32 28 28 28 34 23 23 18
21 25 32 24 23 14 13 13 15 18 10 10 17 21 18 28 19 19 16 16 22 28 24 24 17 12 24 12 12 12 24 27 37 40 37 37 37 23 23 11 11 11 25 20 28 28 22 22 21 26
23 25 28 30 33 37 39 31 31 35 37 37 28 24 12 13 16 16 16 14 14 15 30 30 31 31 39 32 32 17 17 17 23 21 17 19 8 8 8 8 11 15 19 20 20 12 11 11 17 21
30 23 14 9 9 9 9 9 9 9 11 28 28 30 26 16 16 16 22 25 12 10 9 9 9 9 10 10 15 10 10 8 8 10 10 10 16 20 11 13 10 12 16 18 18 16 24 12 9 9
9 8 8 10 9 8 8 10 10 10 10 10 11 11 9 10 13 10 9 8 10 11 10 10 10 8 6 6 8 8 11 16 19 30 22 20 16 12 9 9 9 9 9 12 12 11 12 24 18 10
8 8 8 10 10 10 10 10 10 10 11 11 11 11 21 21 26 15 11 10 10 10 10 9 9 9 14 13 10 12 12 12 11 10 8 8 8 8 10 12 20 14 13 8 8 8 8 8 8 8
8 8 8 8 8 11 15 15 14 9 8 8 7 6 6 8 8 8 6 6 8 8 8 6 6 8 8 8 10 8 8 6 7 10 8 8 6 6 6 6 9 8 8 8 8 8 8 10 15 13
8 8 8 8 8 10 18 17 17 15 14 15 16 13 13 8 8 6 6 7 8 8 14 12 14 11 12 10 6 6 8 8 8 9 14 19 21 28 24 24 11 11 8 8 8 8 8 6 6 8
8 8 8 8 8 8 8 6 6 8 8 8 10 10 11 10 12 11 11 12 10 10 10 10 9 9 17 12 8 8 10 9 9 14 14 10 11 9 8 8 8 8 8 8 8 8 11 13 10 10
10 11 11 10 10 6 6 6 6 9 9 11 10 11 7 7 8 6 6 8 8 11 11 9 9 9 13 8 8 8 8 6 6 8 8 9 9 9 9 9 11 9 11 10 10 10 10 8 8 11
10 8 8 8 10 10 10 9 9 12 12 14 12 9 10 8 8 8 9 13 9 8 7 7 8 10 10 8 8 8 8 8 8 8 6 6 8 8 10 9 9 9 12 12 12 9 9 9 10 16
15 13 10 9 8 8 8 6 6 6 8 8 8 8 7 7 8 8 11 12 20 23 12 12 12 13 12 10 10 6 7 8 8 12 10 8 8 8 8 8 13 13 8 8 8 8 8 8 8 8
8 8 8 8 8 8 12 6 7 8 8 8 6 6 6 8 7 6 7 7 6 8 8 8 6 8 8 8 8 7 6 8 6 6 8 8 8 8 8 8 8 6 6 8 8 10 10 13 10 6
8 6 7 11 6 6 8 6 |
|---|
