Query= MSMg01no164_n21.b1 MSMg01no164_n21.b1 CHROMAT_FILE:
MSMg01no164_n21.b1 PHD_FILE: MSMg01no164_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:50 2005
(320 letters)
>mm_chr1_73315947_73316665
Length = 719
Score = 576 bits (298), Expect = e-169
Identities = 310/314 (98%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaaaaccaaaagctaccttttacacgttcaaaaagccgaatccatagttgcta 64
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 517 gaattctcaaaaccaaaagctaccttttacacgttcaaaaagccgattccatagttgcta 458
Query: 65 tgtattccaggtgcaagaaggatcccagagaatggaggtttcactggtctctcacacctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgtattccaggtgcaagaaggatcccagagaatggaggtttcactggtctctcacacctc 398
Query: 125 tgaggctaagagacgggggaaagaggggagaagaagctgtgttggtgactgtgagtctga 184
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 397 tgaggctaagagac-ggggaaagagggaagaagaagctgtgttggtgactgtgagtctga 339
Query: 185 ccactaaattaggctgatggaaaagtatggcttccttaattttcagggtgtggaaagctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ccactaaattaggctgatggaaaagtatggcttccttaattttcagggtgtggaaagctc 279
Query: 245 cctcccggggctgagtgttcctctgaggactggacagcaggaaacacctgcttcactctt 304
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cctcccagggctgagtgttcctctgaggactggacagcaggaaacacctgcttcactctt 219
Query: 305 ccctggcttttttc 318
||||||||||||||
Sbjct: 218 ccctggcttttttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_n21.g1 MSMg01no164_n21.g1 CHROMAT_FILE:
MSMg01no164_n21.g1 PHD_FILE: MSMg01no164_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:50 2005
(289 letters)
>mm_chr1_73161360_73162048
Length = 689
Score = 514 bits (266), Expect = e-150
Identities = 281/286 (98%)
Strand = Plus / Plus
Query: 1 agcttccctcatgggtgctgactcacatccttaccctaggtgaagcgttgaagactgcac 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 agcttccctcatgggtgctgactcacatccttaccctaggtgaatcgttgaagactgcac 260
Query: 61 tgttcatactgacagagatgaagatgagaaagaggagatttgaaaactgtagagggagtg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttcatacggacagagatgaagatgagaaagaggagatttgaaaactgtagagggagtg 320
Query: 121 cagggggaaaaaagtcaggaagtgcctcaccccagccaagaccaacagctgaaaaccaga 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaggggaaaaaagtcaggaagtgcctcaccccagccaagaccaacagctgaaaaccaga 380
Query: 181 gatgaaacctggaaggaccatggaaaatgcagtgggcagcttgaagctgcgtcaaaccaa 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 gatgaaacctggaaggaccatggaaaacgcagtgggcagcttgaagctgcgtcaaaccaa 440
Query: 241 tgtgcagcctatataatccagaacaatttggagatattgggagcaa 286
||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgcagccaatataatccagaacaatttggagatattgggagcaa 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
