Query= MSMg01no167_a02.b1 MSMg01no167_a02.b1 CHROMAT_FILE:
MSMg01no167_a02.b1 PHD_FILE: MSMg01no167_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:40 2005
(401 letters)
>mm_chr1_128062305_128063105
Length = 801
Score = 617 bits (319), Expect = 0.0
Identities = 367/383 (95%)
Strand = Plus / Minus
Query: 19 ggggcaaatatctattcaccccagacagggcacaaataaaggacagaagcagcaattcta 78
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ggggaaaatatctattcaccccagacagggcacaaataaaggacagaagcagcaattcta 740
Query: 79 ccatagtgcatcttggctgaaccagtaagtttattaggctcactggcacaggataggggt 138
|||||||||||||||| ||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 739 ccatagtgcatcttggttgaaccagtaagtttattaggctcactagcacaagaaaggggt 680
Query: 139 ttcttacgagaccatgagtgaccccgaagcaaccatatcacctagcgtcaccccattatg 198
||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 679 ttcttacaagaccatgagtgaccctgaagcaaccatatcacctagtgtcaccccattatg 620
Query: 199 agtatgtcacagaagctgcatcatagcatgtctctttgagctaacattcagctgtactcc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agtatgtcacagaagctgcatcatagcatgtctctttgagctaacattcagctgtactcc 560
Query: 259 agcatctcccagctgggaacactgaaggctgacctcccccaaggtagagtcccatgagcc 318
||||||| ||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 559 agcatcttccagctgggaacactgaaggctgaccttccccaagggagagttccatgagcc 500
Query: 319 tcccctccttccactgggagtccaacttacttactcttattcttactttctttgctcagt 378
||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 499 tcccctccttccactcggagtccaacttacttactcttactcttactttctctgctcagt 440
Query: 379 tatgtgctatggataccagctca 401
|||||||||||| ||||||||||
Sbjct: 439 tatgtgctatggctaccagctca 417
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_a02.g1 MSMg01no167_a02.g1 CHROMAT_FILE:
MSMg01no167_a02.g1 PHD_FILE: MSMg01no167_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:40 2005
(321 letters)
>mm_chr1_127887825_127888544
Length = 720
Score = 576 bits (298), Expect = e-169
Identities = 315/321 (98%), Gaps = 1/321 (0%)
Strand = Plus / Plus
Query: 1 atatacagcctggaggtcttgttggattgaagagataatgcagacattaagaggaaggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatacagcctggaggtcttgttggattgaagagataatgcagacattaagaggaaggga 260
Query: 61 cctggcagctaggattggcagggcagtgcactggagaggaaagctggtaacagggctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctggcagctaggattggcagggcagtgcactggagaggaaagctggtaacagggctttc 320
Query: 121 cttacagtcttgtccgagcacagcagatgcgcgaggtgaggctcagatcagagagacaat 180
|||| ||||||||| ||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 321 cttatagtcttgtctgagcacagcagatgcacaaggtgaggctcagatcagagagacaat 380
Query: 181 tactatgaagcactaggttgcataattcctggagctccacncaagacagaaaataataag 240
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 381 tactatgaagcactaggttgcataattcctggagctc-acacaagacagaaaataataag 439
Query: 241 acatttcaaccactggaagaggtgaggcctttcaatatgaggaacacagaattcggagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acatttcaaccactggaagaggtgaggcctttcaatatgaggaacacagaattcggagag 499
Query: 301 agttcaaacctcaggagtgaa 321
|||||||||||||||||||||
Sbjct: 500 agttcaaacctcaggagtgaa 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 720
Length adjustment: 9
Effective length of query: 312
Effective length of database: 711
Effective search space: 221832
Effective search space used: 221832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
