Query= MSMg01no168_p04.b1 MSMg01no168_p04.b1 CHROMAT_FILE:
MSMg01no168_p04.b1 PHD_FILE: MSMg01no168_p04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:31 2005
(126 letters)
>mm_chr1_77417155_77417680
Length = 526
Score = 230 bits (119), Expect = 2e-65
Identities = 122/123 (99%)
Strand = Plus / Minus
Query: 4 ggaattctcatccccactgggtataattgctacctgtcttctagacagcagaagaaagct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggaattctcatccccactgggtataattgctacctgtcttctagacagcagaagaaagct 267
Query: 64 ttgggggaaatggtgggagaagggagaagaatcttgggacaattgggtgtggtggtttgc 123
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 266 ttgggggaaatggtgggagaagggaggagaatcttgggacaattgggtgtggtggtttgc 207
Query: 124 cac 126
|||
Sbjct: 206 cac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 526
Length adjustment: 8
Effective length of query: 118
Effective length of database: 518
Effective search space: 61124
Effective search space used: 61124
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no168_p04.g1 MSMg01no168_p04.g1 CHROMAT_FILE:
MSMg01no168_p04.g1 PHD_FILE: MSMg01no168_p04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:31 2005
(288 letters)
>mm_chr1_77279842_77280529
Length = 688
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%), Gaps = 1/285 (0%)
Strand = Plus / Plus
Query: 1 catgagttctatagccctccctcagtccctgtaagagagaccctagtaacaccttgctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgagttctatagccctccctcagtccctgtaagagagaccctagtaacaccttgctac 260
Query: 61 ttaaagtgtgattcttggaccagaagcactgttctccgatgactactatttagaataata 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 ttaaagtgtgattcttggaccagaagcactgttctccgatgactgctatttagaataata 320
Query: 121 attttaaaaaatcattatagcttctttgggccacagacactttttctttcatgggtctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttaaaaaatcattatagcttctttgggccacagacactttttctttcatgggtctct 380
Query: 181 tcttccatgaaaaaaaaaaa-ccataaaaattacatttaatgattcagctaccttaaatg 239
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttccatgaaaaaaaaaaaaccataaaaattacatttaatgattcagctaccttaaatg 440
Query: 240 tgataaaatgatatattaaaacattttctttaacttaaaagattt 284
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgataaaatgatatattaaaacattttctttaacttaaaagattt 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
