Query= MSMg01no169_n09.b1 MSMg01no169_n09.b1 CHROMAT_FILE:
MSMg01no169_n09.b1 PHD_FILE: MSMg01no169_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:38 2005
(303 letters)
>mm_chr1_35163050_35163752
Length = 703
Score = 557 bits (288), Expect = e-163
Identities = 294/296 (99%)
Strand = Plus / Plus
Query: 8 gaattcaaaggaaaccagatctgcactctgaaatgatcaaaagaatctaaattctttggc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcaaaggaaaccagatctgcactctgaaatgatcaaaagaatctaaattctttggc 267
Query: 68 ttatgaaaaaaatgaaagagggcataaattactaatatcaaaatgagagaaacatttatt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttatgaaaaaaatgaaagagggcataaattactaatatcaaaatgagagaaacatttatt 327
Query: 128 attgattacactgatattgcaggaataacaaggaaaatgttgtgaacagtgggtagggac 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 attgattacactgatattgcaggaataacaaggaaaatgttgtgaacagtgggtagggac 387
Query: 188 agaggaaagagagagaaagtgagtggacaaaaggagagagagcctgtggtataagaaaga 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agaggaaagagagagaaagtgagtggacaaaaggagagagagcctgtggtataagaaaga 447
Query: 248 gctctgtagcttcttgactttagtggatcttgttagcctgtgtggacacacacaca 303
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 448 gctctgtagcttcttgactttcgtggatcttggtagcctgtgtggacacacacaca 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_n09.g1 MSMg01no169_n09.g1 CHROMAT_FILE:
MSMg01no169_n09.g1 PHD_FILE: MSMg01no169_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:38 2005
(295 letters)
>mm_chr1_35313089_35313783
Length = 695
Score = 340 bits (176), Expect = 4e-98
Identities = 205/220 (93%), Gaps = 10/220 (4%)
Strand = Plus / Minus
Query: 1 gcatcagccagtccctggattcctttgtctgaatgcctgcatgcctatgagtacagaccc 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 487 gcatcagccagtccctggattcctttgtctgaatgtgtgcatgcctatgagtacagaccc 428
Query: 61 acaaaa-----c-----atcaagaacaccaagagactagaaaggaagagggctcagggtt 110
| |||| | |||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 427 agaaaaagcagcatagtatcatgaacaccaagagactagaaaggaagagggctcagggct 368
Query: 111 taggtgagttacagccaagatggcacctgcagcagggaagccatggactgactcccagcc 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 taggtgagttacagccaagatggcacctgcagcagggaagccatggactgactcccagcc 308
Query: 171 agggagaaccagattctaccacaggccaggctgggttttt 210
||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 agggagaaccagattctaccacaggccaggctgggttttt 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
