MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-171O19
Chromosome	1 (Build37)
Map Location	57,472,509 - 57,472,825
singlet/doublet	singlet
Overlap gene	9430016H08Rik
Upstream gene	Hsfy2, Satb2, EG329160, 9130024F11Rik, LOC100042869, LOC383509, 1700066M21Rik, 1110034B05Rik
Downstream gene	LOC667339, 2810022L02Rik, Kctd18, Sgol2, Aox1, Aox3, Aox4, Aox3l1, EG628262, Bzw1, Clk1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Hsfy2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71066 MGI:1918316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Satb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212712 MGI:2679336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG329160 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329160 MGI:3645280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	9130024F11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78900 MGI:1926150
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs

name	LOC100042869 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC383509 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383509
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	1700066M21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73467 MGI:1920717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 3 Proteins

name	1110034B05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68736 MGI:1915986
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9430016H08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68115 MGI:1915365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 91 ESTs, 4 Proteins

name	LOC667339 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	2810022L02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67198 MGI:1914448
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kctd18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:51960 MGI:3603813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sgol2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68549 MGI:1098767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aox1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11761 MGI:88035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aox3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71724 MGI:1918974
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aox4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71872 MGI:1919122
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aox3l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213043 MGI:3529596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG628262 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628262 MGI:3643892
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Bzw1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66882 MGI:1914132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12747 MGI:107403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Hsfy2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113461992 GeneID:71066 MGI:1918316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock transcription factor, Y linked 2 transcript_id : NM_027661.2

name	Satb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:145046228 GeneID:212712 MGI:2679336
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : special AT-rich sequence binding protein 2 transcript_id : NM_139146.2

name	EG329160 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363421 GeneID:329160 MGI:3645280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG329160 transcript_id : XM_989755.1

name	LOC100042869 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233892 GeneID:100042869
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100042869 transcript_id : XM_001478925.1

name	1700066M21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233894 GeneID:73467 MGI:1920717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 3 Proteins product : RIKEN cDNA 1700066M21 gene transcript_id : XM_129727.5

name	1110034B05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83627690 GeneID:68736 MGI:1915986
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110034B05 gene transcript_id : NM_001037742.1

name	9430016H08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233895 GeneID:68115 MGI:1915365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 91 ESTs, 4 Proteins product : RIKEN cDNA 9430016H08 gene transcript_id : XM_001478981.1

name	2810022L02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801973 GeneID:67198 MGI:1914448
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810022L02 gene transcript_id : NM_144882.3

name	Kctd18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345025 GeneID:51960 MGI:3603813
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium channel tetramerisation domain containing 18 transcript_id : NM_030211.2

name	Sgol2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51092284 GeneID:68549 MGI:1098767
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : shugoshin-like 2 (S. pombe) transcript_id : NM_199007.1

name	Aox1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347466 GeneID:11761 MGI:88035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldehyde oxidase 1 transcript_id : NM_009676.2

name	Aox3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205419 GeneID:71724 MGI:1918974
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldehyde oxidase 3 transcript_id : NM_023617.2

name	Aox4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205421 GeneID:71872 MGI:1919122
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldehyde oxidase 4 transcript_id : NM_023631.2

name	Aox3l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56606022 GeneID:213043 MGI:3529596
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldehyde oxidase 3-like 1 transcript_id : NM_001008419.1

name	EG628262 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363430 GeneID:628262 MGI:3643892
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : predicted gene, EG628262 transcript_id : XM_900516.2

name	Bzw1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892965 GeneID:66882 MGI:1914132
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basic leucine zipper and W2 domains 1 transcript_id : NM_025824.3

name	Clk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111038131 GeneID:12747 MGI:107403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC-like kinase 1 transcript_id : NM_009905.2

name	Clk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111038134 GeneID:12747 MGI:107403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CDC-like kinase 1 transcript_id : NM_001042634.1

name	Hsfy2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037231 CCDS:CCDS14964.1 GeneID:71066 MGI:1918316
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 note : heat shock transcription factor, Y linked 2 like product : heat shock transcription factor, Y-linked protein_id : NP_081937.1

name	Satb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20982839 CCDS:CCDS14965.1 GeneID:212712 MGI:2679336
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : KIAA1034-like DNA binding protein; two cut domains-containing homeodomain protein product : special AT-rich sequence binding protein 2 protein_id : NP_631885.1

name	LOC100042869 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233893 GeneID:100042869
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478975.1

name	EG329160 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363422 GeneID:329160 MGI:3645280
definition	codon_start : 1 product : hypothetical protein protein_id : XP_994849.1

name	1700066M21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38049508 GeneID:73467 MGI:1920717
definition	codon_start : 1 product : hypothetical protein LOC73467 protein_id : XP_129727.2

name	1110034B05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83627691 CCDS:CCDS14966.1 GeneID:68736 MGI:1915986
definition	codon_start : 1 product : hypothetical protein LOC68736 protein_id : NP_001032831.1

name	9430016H08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233896 GeneID:68115 MGI:1915365
definition	codon_start : 1 product : hypothetical protein LOC68115 protein_id : XP_001479031.1

name	2810022L02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21536268 GeneID:67198 MGI:1914448
definition	codon_start : 1 product : hypothetical protein LOC67198 protein_id : NP_659131.1

name	Kctd18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29336039 CCDS:CCDS14968.1 GeneID:51960 MGI:3603813
definition	codon_start : 1 exception : mismatches in translation product : potassium channel tetramerisation domain containing 18 protein_id : NP_084487.1

name	Sgol2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51092285 GeneID:68549 MGI:1098767
definition	GO_component : GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]; GO:0045132 - meiotic chromosome segregation [Evidence IEA] codon_start : 1 product : tripin protein_id : NP_950172.1

name	Aox1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347467 GeneID:11761 MGI:88035
definition	GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0004031 - aldehyde oxidase activity [Evidence IDA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : retinal oxidase; aldehyde oxidase 2 product : aldehyde oxidase 1 protein_id : NP_033806.2

name	Aox3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205420 CCDS:CCDS14969.1 GeneID:71724 MGI:1918974
definition	GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0004031 - aldehyde oxidase activity [Evidence IDA]; GO:0009055 - electron carrier activity [Evidence ISS] [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IDA] codon_start : 1 note : aldehyde oxidase structural homolog 2; aldehyde oxidase 1 product : aldehyde oxidase 3 protein_id : NP_076106.2

name	Aox4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205422 CCDS:CCDS14970.1 GeneID:71872 MGI:1919122
definition	GO_function : GO:0004031 - aldehyde oxidase activity [Evidence ISS]; GO:0009055 - electron carrier activity [Evidence IEA] [Evidence ISS]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence ISS] codon_start : 1 note : aldehyde oxidase structural homolog 2 product : aldehyde oxidase 4 protein_id : NP_076120.2

name	Aox3l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56606023 GeneID:213043 MGI:3529596
definition	GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : aldehyde oxidase-like protein 3 product : aldehyde oxidase 3-like 1 protein_id : NP_001008419.1

name	EG628262 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363431 GeneID:628262 MGI:3643892
definition	codon_start : 1 product : hypothetical protein protein_id : XP_905609.2

name	Bzw1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385296 CCDS:CCDS14971.1 GeneID:66882 MGI:1914132
definition	codon_start : 1 product : basic leucine zipper and W2 domains 1 protein_id : NP_080100.1

name	Clk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111038135 GeneID:12747 MGI:107403
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0018105 - peptidyl-serine phosphorylation [Evidence IDA]; GO:0018107 - peptidyl-threonine phosphorylation [Evidence IDA]; GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; CDC-like kinase product : CDC-like kinase 1 isoform 1 protein_id : NP_001036099.1

name	LOC383509 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383509
definition	number : 1 pseudo : _no_value

name	LOC667339 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667339
definition	number : 2 pseudo : _no_value

name	LOC667339 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667339
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128898
definition	standard_name : D1Mit530

name	(CDS detail)
type	STS
link
xref	UniSTS:498445
definition	standard_name : Satb2

name	(CDS detail)
type	STS
link
xref	UniSTS:498403
definition	standard_name : Satb2

name	(CDS detail)
type	STS
link
xref	UniSTS:124415
definition	standard_name : 41.MMHAP57FLF5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:498443
definition	standard_name : Satb2

name	(CDS detail)
type	STS
link
xref	UniSTS:233178
definition	standard_name : RH143932

name	(CDS detail)
type	STS
link
xref	UniSTS:498444
definition	standard_name : Satb2

name	(CDS detail)
type	STS
link
xref	UniSTS:128738
definition	standard_name : D1Mit377

name	(CDS detail)
type	STS
link
xref	UniSTS:260591
definition	standard_name : BM389956

name	(CDS detail)
type	STS
link
xref	UniSTS:234130
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178401
definition	standard_name : AI428479

name	(CDS detail)
type	STS
link
xref	UniSTS:234131
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178402
definition	standard_name : C78988

name	(CDS detail)
type	STS
link
xref	UniSTS:225241
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:116700
definition	standard_name : D1Mit74

name	(CDS detail)
type	STS
link
xref	UniSTS:128458
definition	standard_name : D1Mit124

name	(CDS detail)
type	STS
link
xref	UniSTS:150743
definition	standard_name : D2S1714E

name	(CDS detail)
type	STS
link
xref	UniSTS:28562
definition	standard_name : RH18299

name	(CDS detail)
type	STS
link
xref	UniSTS:164116
definition	standard_name : AI842453

name	(CDS detail)
type	STS
link
xref	UniSTS:158796
definition	standard_name : AI480531

name	(CDS detail)
type	STS
link
xref	UniSTS:178399
definition	standard_name : AA987173

name	(CDS detail)
type	STS
link
xref	UniSTS:123256
definition	standard_name : 15.MMHAP26FLE3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:167300
definition	standard_name : D1Ertd8e

name	(CDS detail)
type	STS
link
xref	UniSTS:234132
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:165079
definition	standard_name : AV008062

name	(CDS detail)
type	STS
link
xref	UniSTS:158797
definition	standard_name : AI196512

name	(CDS detail)
type	STS
link
xref	UniSTS:128736
definition	standard_name : MT4983

name	(CDS detail)
type	STS
link
xref	UniSTS:128737
definition	standard_name : D1Mit376.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128899
definition	standard_name : D1Mit531

name	(CDS detail)
type	STS
link
xref	UniSTS:165080
definition	standard_name : AI326299

name	(CDS detail)
type	STS
link
xref	UniSTS:128556
definition	standard_name : D1Mit214

name	(CDS detail)
type	STS
link
xref	UniSTS:142250
definition	standard_name : D1Mit5.2

name	(CDS detail)
type	STS
link
xref	UniSTS:162173
definition	standard_name : RH125351

name	9130024F11Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149233889 GeneID:78900 MGI:1926150
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs product : RIKEN cDNA 9130024F11 gene transcript_id : XR_035393.1

clone name	MSMg01-500C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062E16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-490A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111G18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-082E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324H04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-171O19.T7 (MSMg01no171_o19.b1)	MSMg01-171O19.TJ (MSMg01no171_o19.g1)
ACC	AG368001	AG368002
length	715	788
length of high quality (start - end)	320 (46 - 365)	140 (75 - 214)
definition	CHROMAT_FILE: MSMg01no171_o19.b1 PHD_FILE: MSMg01no171_o19.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:42:15 2005	CHROMAT_FILE: MSMg01no171_o19.g1 PHD_FILE: MSMg01no171_o19.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:42:16 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG AATTCACACAAGGAGTAAAGCCTGATTGGACGATTGCGCGGATTGAACAC TCCAAGTTACTAGAATAATCTTTCCTGGAAAAAAAAATCAGGGCGTGAAC TCTTAATAATTGCTGTGAAAAACTAAGGAAGACAAGTTTCTGGATGATTT GATTTTAACTTAATTAAGTCTGTGGATTACTTTTGTATTATTTGGAAATA CTCAGTATATTGACCTAATACAATAAAACATTTTCCACAGATTGCTAGTG TTCTTTAAAGGAGGTCAAAGTAAAACGCAAAACTACAGCACCACATTGGT GTCCTGTTTAATATCATTCTACACTCCACCCCCCTATATGTAAAACACAG AACTACAGCACCACATTGGTGTCCTGATGAAAGACATTCAAATGTTTTAT ATGAACATGTGTCACAGACTAGTTTTATACATGTGAATTATTGAAACTAC TGTATATCTCTAATGATCCAAGTTTCTGCAAGATTTCTACAAGCCATTGA GCCTAGTATGTTTGATTATCTGGATAGTGATCCAGATAAGGACTGGGTAG AACCATAGCAGCTTGACCTCTGTAGGACATCCATGTTTGTTTACTGTTCA CAGTAGTGATGAAATGGAGCCCAGCTAGATGGCCCTCAGCAAGCACTAGA ATACCTGGAAAAAAG	CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXTGTGAGACTGCCCGTGGTCCTACCTG GCTTCTAGCTGGCTGGCTGGCATCCTTGTGTCATCCTTGCTGATCAACCA AAAAGAGAGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTNNTTTTTTNNTNTNN NNNNNNNNNNTTTTTTTTGTTGNTTCCNNNNCCCCNNCCCCNGNNNTTNT TTNTTTNTTNTNTTTGTTTNCCCCCCCCTTAAAAAAAAAAAAAAAAATTG GGGGGGGGGGGGGGGGTTTTTTTCCCTCCCCTTTTCCTCTTTTCTTCACT CATACCTTATTATCATGTTACTATATCTTTGTTTATATGTTTCATATATT TATACCCTACAATTCTCACCCCCCCCACAAAAACTCTATTTTTCCCCCTA TGCCCTTACTTTTCCCTCTTTTTATCCTCCATTTACTTCCCTCGTTAAAC TTCCGTTCGCTACCAATTACACTTTCACTCAATTCCTTCTCTCTTCCGTT TCTGCGTTCCCCCCTTTTTTTCTCGGTGGTTCTTCGCCTGTACAACCTCA CGCATTAAACTTCTTGTTTTTTCTCTCCTCCCCCACAC
quality values	Open. Hide. 8 8 8 8 10 10 15 18 37 37 33 32 32 28 28 37 37 37 37 37 39 39 44 44 59 35 32 36 36 36 36 47 53 47 43 43 43 43 43 43 32 32 22 26 26 36 41 47 47 42 47 47 47 50 50 68 68 51 51 51 48 48 50 50 50 50 57 57 57 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 68 68 68 68 68 51 51 51 51 51 51 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 32 28 13 11 11 10 11 27 34 59 68 68 68 68 51 51 51 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 42 36 30 36 33 31 31 30 31 37 59 59 57 68 57 57 57 57 59 59 59 59 59 59 57 57 59 59 57 57 57 53 53 50 59 41 34 34 22 23 11 12 6 6 6 6 6 6 9 12 11 8 6 6 6 6 6 7 13 14 11 12 12 12 12 21 25 34 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 57 57 57 57 57 53 53 53 53 53 57 53 43 34 30 25 23 21 15 17 12 9 9 9 9 10 15 8 8 8 8 8 10 16 18 25 30 41 47 48 48 48 48 57 57 57 57 59 59 57 57 57 57 57 57 59 59 59 59 57 57 57 57 54 57 57 57 57 57 54 50 46 57 47 47 43 43 43 48 57 48 50 50 68 68 50 57 59 59 59 59 57 57 57 57 57 57 48 48 48 57 57 59 48 37 37 37 37 37 37 41 43 41 34 31 41 41 41 35 37 44 59 59 43 41 36 24 25 15 18 18 25 34 39 37 32 28 31 39 37 37 39 39 39 43 41 41 37 37 41 37 37 37 28 34 30 31 31 43 41 39 34 32 38 39 39 43 32 34 28 21 21 23 23 30 37 28 24 17 14 14 14 20 11 10 10 10 17 17 15 12 10 14 19 14 10 10 12 12 14 17 21 21 28 32 37 37 37 29 30 35 41 37 37 41 37 30 17 17 10 10 10 10 11 11 25 21 24 30 28 28 24 31 19 19 15 15 15 14 16 17 10 8 8 8 8 8 11 10 10 10 10 15 15 17 13 14 15 16 16 30 20 20 16 15 9 12 8 8 8 8 8 7 8 9 8 8 9 9 11 9 11 8 8 9 9 12 8 8 8 8 8 11 11 11 8 8 8 8 8 8 10 10 9 9 9 9 9 11 8 8	Open. Hide. 11 11 17 11 11 11 9 9 23 12 10 10 9 22 22 37 37 37 50 50 53 53 53 53 53 53 53 53 59 59 59 59 48 57 48 48 37 36 36 36 40 42 54 54 54 54 54 48 50 50 50 51 51 68 68 68 68 68 68 48 48 41 41 46 46 57 57 57 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 59 59 59 59 57 59 57 57 57 53 53 53 53 53 57 59 59 59 59 59 59 59 24 24 13 19 12 12 10 10 11 11 14 22 34 34 47 42 50 50 50 50 53 53 57 57 57 38 38 42 42 42 47 53 53 53 53 53 53 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 47 47 23 23 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 10 12 14 19 19 23 20 19 18 14 12 9 3 0 0 3 8 10 8 10 3 0 0 3 0 3 0 0 0 0 0 0 0 0 0 0 0 0 3 7 7 9 9 7 7 6 6 6 6 3 0 3 12 12 3 0 0 0 0 3 7 7 3 0 0 3 16 13 3 0 3 0 0 0 3 3 0 3 7 3 0 3 10 3 0 3 3 0 3 0 3 7 6 9 8 7 3 0 3 15 25 30 22 13 13 8 8 8 6 10 15 16 22 22 32 37 32 28 20 17 19 17 10 8 8 8 8 8 8 8 9 10 11 17 17 14 13 16 15 12 11 10 8 8 8 10 10 11 9 11 9 10 8 8 8 8 8 10 10 11 9 11 10 10 10 11 10 10 11 11 11 12 8 10 6 6 8 8 6 6 7 6 8 8 10 8 8 8 8 8 8 10 10 11 11 8 8 8 8 10 8 10 10 10 13 8 10 8 8 8 8 8 8 8 8 8 8 8 10 10 10 10 10 8 8 10 8 8 6 6 6 8 8 10 8 8 8 9 10 10 10 8 8 6 6 10 9 9 9 10 10 10 10 9 9 10 9 9 10 8 8 8 8 8 6 6 6 10 8 12 13 17 13 10 10 10 10 12 10 11 11 21 19 16 11 9 9 10 10 10 10 10 19 11 12 12 12 15 17 16 14 14 14 13 13 9 8 8 6 6 6 8 8 8 8 8 9 16 18 12 10 8 8 8 8 8 10 8 8 6 6 8 8 8 6 6 6 6 6 8 8 8 8 8 8 8 8 8 8 10 11 13 12 9 10 8 8 8 8 8 8 10 10 10 10 15 16 28 18 15 9 8 8 11 11 15 16 13 11 9 7 10 8 8 8 10 11 12 13 10 10 10 10 8 10 15 12 10 10 8 8 8 8 8 8 10 9 9 9 9 9 9 10 9 8 8 12 12 8 8 6 6 8 8 11 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 10 8 8 6 6 10 8 17 14 11 11 11 11 11 13 12 12 11 11 11 9 6 6 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no171_o19.b1 MSMg01no171_o19.b1 CHROMAT_FILE:
MSMg01no171_o19.b1 PHD_FILE: MSMg01no171_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:15 2005
         (320 letters)



>mm_chr1_57472306_57473025
          Length = 720

 Score =  598 bits (309), Expect = e-175
 Identities = 315/317 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcacacaaggagtaaagcctgattggacgattgcgcggattgaacactccaagtt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacacaaggagtaaagcctgattggacgattgcgcggattgaacactccaagtt 263

                                                                       
Query: 64  actagaataatctttcctggaaaaaaaaatcagggcgtgaactcttaataattgctgtga 123
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 actagaataatctttcttggaaaaaaaaatcagggcgtgaactcttaataattgctgtga 323

                                                                       
Query: 124 aaaactaaggaagacaagtttctggatgatttgattttaacttaattaagtctgtggatt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaactaaggaagacaagtttctggatgatttgattttaacttaattaagtctgtggatt 383

                                                                       
Query: 184 acttttgtattatttggaaatactcagtatattgacctaatacaataaaacattttccac 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acttttgtattatttggaaatactcagtatattgacctaatacaataaaacattttccac 443

                                                                       
Query: 244 agattgctagtgttctttaaaggaggtcaaagtaaaacgcaaaactacagcaccacattg 303
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 444 agattgctagtgttctttaaaggaggtcaaagtaaaacacaaaactacagcaccacattg 503

                            
Query: 304 gtgtcctgtttaatatc 320
           |||||||||||||||||
Sbjct: 504 gtgtcctgtttaatatc 520


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space:   221121
Effective search space used:   221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information