Query= MSMg01no172_j21.b1 MSMg01no172_j21.b1 CHROMAT_FILE:
MSMg01no172_j21.b1 PHD_FILE: MSMg01no172_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:07 2005
(316 letters)
>mm_chr1_171459993_171460708
Length = 716
Score = 571 bits (295), Expect = e-167
Identities = 307/311 (98%)
Strand = Plus / Minus
Query: 4 ggaattctttcagagagaaacaattatgggtcagaggtgtgacagtgggatggcaacccc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ggaattctttcagagagaaacaattatgggtcagaggtgtgacagtgggatggcaacccc 647
Query: 64 atccctcacttgatgccctgtctttctgctggaggtgggctctataagttccctctccct 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 atccctcacttgatgtcctgtctttctgctggaggtgggctctataagttccctctccct 587
Query: 124 actgccgggcatttcatcaaaggtcccttcctatgagtcctgggagtctctcacctccca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 actgccgggcatttcatcaaaggtcccttcctatgagtcctgggagtctctcacctccca 527
Query: 184 tctctcaagtgctgactttacgggcatgagccacaagaatggcgtcagtgtgacttgttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tctctcaagtgctgactttacgggcatgagccacaagaatggcgtcagtgtgacttgttt 467
Query: 244 gaatgcttgccaattttttatgtatctccattgcttctccatctctggattaaaccaaga 303
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 466 gaatgcttgccaattttttatgtatctccattgcgccaccatctctggattaaaccaaga 407
Query: 304 accatttatca 314
|||||||||||
Sbjct: 406 accatttatca 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no172_j21.g1 MSMg01no172_j21.g1 CHROMAT_FILE:
MSMg01no172_j21.g1 PHD_FILE: MSMg01no172_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:07 2005
(299 letters)
>mm_chr1_171427171_171427869
Length = 699
Score = 532 bits (275), Expect = e-155
Identities = 292/299 (97%), Gaps = 5/299 (1%)
Strand = Plus / Plus
Query: 1 tctatgacattctgctaggacagtttgagaagccaagatctagtgcagacac-ccacagc 59
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 201 tctatgacattctgctaggacagtttgagaagccaagatctagtgcaga-aggccacagc 259
Query: 60 gtggctaagcatccttgtgctcctataacaaagtcacaagataataaagacataaagaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtggctaagcatccttgtgctcctataacaaagtcacaagataataaagacataaagaag 319
Query: 120 gaagagctgtgttggttcactttggattttctgtccacaactgtcttatttctactcaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaagagctgtgttggttcactttggattttctgtccacaactgtcttatttctactcaaa 379
Query: 180 acatgccaattgcatcagtgaaaaatgaaaccctacaaacttactcttttaaataattac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acatgccaattgcatcagtgaaaaatgaaaccctacaaacttactcttttaaataattac 439
Query: 240 attagaaagtatgttatatcaggactatttcaattttttaaaaatttaa---ttttttt 295
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 440 attagaaagtatggtatatcaggactatttcaattttttaaaaatttaaaaattttttt 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
