Query= MSMg01no173_c19.b1 MSMg01no173_c19.b1 CHROMAT_FILE:
MSMg01no173_c19.b1 PHD_FILE: MSMg01no173_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:48 2005
(292 letters)
>mm_chr1_51147185_51147876
Length = 692
Score = 453 bits (234), Expect = e-132
Identities = 283/320 (88%), Gaps = 34/320 (10%)
Strand = Plus / Minus
Query: 1 aaaaaaattctaagaaatcaggttaatggtaatggtgtacattatatg------------ 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aaaaaaattctaagaaatcaggttaatggtaatggtgtacattatatgtatgtatatata 586
Query: 49 ----------------tacct--atatatatgtgcacacacacatatatatatacatata 90
||| | |||||||| ||||||||||||||||||| |||||
Sbjct: 585 catatatatgtatatatacatacatatatatatgcacacacacatatatat----atata 530
Query: 91 cataaatatgtatatgtatacatacacacacatacacatgattctaataaccttagaaaa 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cataaatatgtatatgtatacatacacacacatacacatgattctaataaccttagaaaa 470
Query: 151 caggtctcccaattctcttcctatagatgaaaaactttgagatgcaacaatggtgaagaa 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 caggtctcccaattctcttcctatagatgaaaaactttgagatgcaacaatggtgaagaa 410
Query: 211 tttattcccaagtacacaggagcaaacagtagcaccaaatataaggcatgacaatctgta 270
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 409 tttattcccaagtacacaggagcaaacagcagcaccaaatataaggcatgacaatctgta 350
Query: 271 gctaagtgcttaattaagca 290
||||||||||||||||||||
Sbjct: 349 gctaagtgcttaattaagca 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no173_c19.g1 MSMg01no173_c19.g1 CHROMAT_FILE:
MSMg01no173_c19.g1 PHD_FILE: MSMg01no173_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:48 2005
(234 letters)
>mm_chr1_50982191_50982824
Length = 634
Score = 453 bits (234), Expect = e-132
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 tcttctgggcattcctttaccttcaacaattcagttgctccatctaaaagccgatttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttctgggcattcctttaccttcaacaattcagttgctccatctaaaagccgatttttc 260
Query: 61 tgatgcctccaatgtctggtcaaattgatctgtgttaatggagtcttcgctggtgagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgatgcctccaatgtctggtcaaattgatctgtgttaatggagtcttcgctggtgagaga 320
Query: 121 tgccattgactggaacgctgagatctgcggctgcttatttgccaggggcaagagacacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccattgactggaacgctgagatctgcggctgcttatttgccaggggcaagagacacca 380
Query: 181 agattcagaaatcttgagaggtgggcgggggagggggaaaggtagtcttgggag 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agattcagaaatcttgagaggtgggcgggggagggggaaaggtagtcttgggag 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
