Query= MSMg01no173_e07.b1 MSMg01no173_e07.b1 CHROMAT_FILE:
MSMg01no173_e07.b1 PHD_FILE: MSMg01no173_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:54 2005
(324 letters)
>mm_chr1_25236407_25237130
Length = 724
Score = 621 bits (321), Expect = 0.0
Identities = 321/321 (100%)
Strand = Plus / Plus
Query: 4 cccccttcccccaacagtgggtgggtttccatgtaaacagctttcaaattcagatgctaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cccccttcccccaacagtgggtgggtttccatgtaaacagctttcaaattcagatgctaa 263
Query: 64 aattctgactttcattccctttgccaaatgtgtttcatctagatatatttctctagagaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aattctgactttcattccctttgccaaatgtgtttcatctagatatatttctctagagaa 323
Query: 124 aactgggtgggaggccaccctagaggactggcagggcacagtttcttgacctaaactcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aactgggtgggaggccaccctagaggactggcagggcacagtttcttgacctaaactcaa 383
Query: 184 gaatacaagacagctctttggtgagaaaagagtgagaatgtgccctttctctgtgtgaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaatacaagacagctctttggtgagaaaagagtgagaatgtgccctttctctgtgtgaat 443
Query: 244 cctgagatccagtctcaggctgtggggagcggccccttctgctgtggctcgtaccttccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cctgagatccagtctcaggctgtggggagcggccccttctgctgtggctcgtaccttccc 503
Query: 304 attcccatggccaaatcagaa 324
|||||||||||||||||||||
Sbjct: 504 attcccatggccaaatcagaa 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no173_e07.g1 MSMg01no173_e07.g1 CHROMAT_FILE:
MSMg01no173_e07.g1 PHD_FILE: MSMg01no173_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:55 2005
(239 letters)
>mm_chr1_25378967_25379605
Length = 639
Score = 433 bits (224), Expect = e-126
Identities = 236/240 (98%), Gaps = 2/240 (0%)
Strand = Plus / Minus
Query: 1 taatttatatacattagtttataaatacagactaatagcattatacttttatatcattta 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 taatttatatacattactttataaatacagactaatagcattatacttttatatcattta 380
Query: 61 -aaaaactttggccttggctcaaagaacttgctttggtatgttaaaacatgttaattact 119
||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 caaaaa-ttttgccttggctcaaagaacttgctttggtatgttaaaacatgttaattact 321
Query: 120 aggaatttgaggtttcttggatctaaataatgacaaagcagtaatttcaactctcattta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggaatttgaggtttcttggatctaaataatgacaaagcagtaatttcaactctcattta 261
Query: 180 gaaaatccagcaatttatatcttttaacttatggttattgtggtagtgtgaataagattg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaaaatccagcaatttatatcttttaacttatggttattgtggtagtgtgaataagattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
