Query= MSMg01no174_c05.b1 MSMg01no174_c05.b1 CHROMAT_FILE:
MSMg01no174_c05.b1 PHD_FILE: MSMg01no174_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:56 2005
(317 letters)
>mm_chr1_5717301_5718017
Length = 717
Score = 601 bits (311), Expect = e-176
Identities = 311/311 (100%)
Strand = Plus / Plus
Query: 5 gaattctctttttgtttcatataacaaggtccagaaaaccctcctgggaagaggattttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctttttgtttcatataacaaggtccagaaaaccctcctgggaagaggattttc 264
Query: 65 gctaaatccactccagtgatagcctcatgactgttattcgccattactaagactgctctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctaaatccactccagtgatagcctcatgactgttattcgccattactaagactgctctt 324
Query: 125 tcccatggaacattgcactgggtctcctcgcagtgctccttctgtctatgtgcttgccct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcccatggaacattgcactgggtctcctcgcagtgctccttctgtctatgtgcttgccct 384
Query: 185 cctctggcctctctagattcaggtttccatgtagccctcaacaccactgtttgaaaatag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctctggcctctctagattcaggtttccatgtagccctcaacaccactgtttgaaaatag 444
Query: 245 aagctcccagagaaatggctcaatggttatgaacactgctctctcaaaggacacaggttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagctcccagagaaatggctcaatggttatgaacactgctctctcaaaggacacaggttc 504
Query: 305 gattcttcata 315
|||||||||||
Sbjct: 505 gattcttcata 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_c05.g1 MSMg01no174_c05.g1 CHROMAT_FILE:
MSMg01no174_c05.g1 PHD_FILE: MSMg01no174_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:56 2005
(235 letters)
>mm_chr1_5907318_5907952
Length = 635
Score = 447 bits (231), Expect = e-130
Identities = 234/235 (99%)
Strand = Plus / Minus
Query: 1 gcatttacgttttcctaggagtcaagtggcttctgcatagcactttgatgtattcagtgg 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gcatttacggtttcctaggagtcaagtggcttctgcatagcactttgatgtattcagtgg 376
Query: 61 actggaatctgatttccacaggtggagagaagagcttgggacactgtagctactttctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 actggaatctgatttccacaggtggagagaagagcttgggacactgtagctactttctat 316
Query: 121 ggacctcatttctccttaaagctatacctccagaaatgtaagctgtgttttcaattctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ggacctcatttctccttaaagctatacctccagaaatgtaagctgtgttttcaattctgt 256
Query: 181 ctccagccttggagtcccggcgtcagcgagcttagtagcagcggggaacgccccc 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctccagccttggagtcccggcgtcagcgagcttagtagcagcggggaacgccccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
