Query= MSMg01no174_k04.b1 MSMg01no174_k04.b1 CHROMAT_FILE:
MSMg01no174_k04.b1 PHD_FILE: MSMg01no174_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:33 2005
(191 letters)
>mm_chr1_93405177_93405764
Length = 588
Score = 331 bits (171), Expect = 2e-95
Identities = 182/187 (97%), Gaps = 3/187 (1%)
Strand = Plus / Plus
Query: 5 gaattcagaggtatctctgcctctgtctcctgcacacattaaaggtgtgcctggggtgtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagaggtatctctgcctctgtctcctgcacacattaaaggtgtgcctggggtgtt 264
Query: 65 ttatttgtttttttttcctcttccccataatttgttttaaaaccttactttatcactcac 124
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 265 ttatttgtttttttt---tcttccccagaatttgttttaaaaccttactttatcactcac 321
Query: 125 acttgctttttctcataaagtgagcaggatgacttgacaggtctttatgacttgagtcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 322 acttgctttttctcataaagtgagcaggatgacttgacaggtctttatgacttgagttaa 381
Query: 185 ctatgtc 191
|||||||
Sbjct: 382 ctatgtc 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 588
Length adjustment: 8
Effective length of query: 183
Effective length of database: 580
Effective search space: 106140
Effective search space used: 106140
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no174_k04.g1 MSMg01no174_k04.g1 CHROMAT_FILE:
MSMg01no174_k04.g1 PHD_FILE: MSMg01no174_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:33 2005
(279 letters)
>mm_chr1_93548876_93549554
Length = 679
Score = 524 bits (271), Expect = e-153
Identities = 277/279 (99%)
Strand = Plus / Minus
Query: 1 agtgtttgtagaatccttattgtaatttcgccatgttctcatgagatagtcagaaggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 agtgtttgtagaatccttattgtaatttcgccatgttctcatgagatagtcagaaggttt 420
Query: 61 tgcccccaaggatccatggtgcccacctctagaagcaggggtgggggcatccgaatgcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tgcccccaaggatccatggtgcccacctctagaagcaggggtgggggcatccgaatgcta 360
Query: 121 ctctctgtagagtccgctgtacagaatcgacaacagacctcttctatagcctggaggctg 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 359 ctctctgtagagtccgctgtacagaatcgacaacagacctcatctatagcctggaggctg 300
Query: 181 ttctgtttcctggatggaaactgataacttcaggctccaggcccagttctctctaaggtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ttctgtttcctggatggaaactgataacttcaggctccaggcccagttctctctaaggtc 240
Query: 241 acatgaacgaggtcctcagcccatgtggaaatgagatca 279
||||||||||||||||||| |||||||||||||||||||
Sbjct: 239 acatgaacgaggtcctcagtccatgtggaaatgagatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
