CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCAAGAGAACCGCGGA
ATTCTTTGTTCTGTCCTGAGCCCCATTTTTTTAATGGGGTTATTTGATTT
TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC
TATCTGATTTAGAATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTT
TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT
TAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC
TGTTCAGGAATTTTTCCCCTGTGTTCATATCTTCAAGGCTTTTCCCCACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGAT
CCACTTAGATTTGACCTTACCACAAGGAGATAAGTATGGATCGATTCGCA
TTCTTCTACACGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATG
CTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTG
ACCATAGGTGTGTGGGTTCATCTCTGGGTCTTCAATTCTATTCCATTGGC
CTACTTGTCTATCAGTATACCAGCTACATGCAGTTTTTATCACAACTGTT
TCTGTTTACAGCTTTAGGCCATGTATGGTAATTCCACCTTAGTTTCTTTT
ATCCTTGACAACAGTTTTTGCTATCTTATCTTTTN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACACTGTCTTCTGGACTTTGTG
AGCACCTACACACACACACACACACACACACACACATCTAAAGATAAATC
TTTAAAAAGTATTTACTTTATTTTTCACAAAATGAATCATAAAAGTTTTG
TTGTTTCATTTTGTTAACTTGCCAATTTTTTTCAAATTAAGTCTAACCTT
AATTTCTTTAATATTTTTAAATTCAGGCAGGGTGACACCATAGCTATCAC
TTCTTTTTTTTTTCATCATTACTACCACAGGTCTTGGCTGGAAATGCACT
CTTTATGAGCAGTGTGGAGCTTGGAATGGAATTAGAAACTAGAGGCAGTA
ACATACAGATATTGACTTCCATGAAACCCAGTGGTGTGATCGTTGATAAC
AGTTATTCATTTGCATGTAATACATCTGAAGTTTTGTTAGTCTGCACCTG
AACACAAGAAGAGAAAATTAGCACAACGTTGTGTGTGGATTGTGGGCATA
AAGATTTAAAGAAGTTTATGAGTGATAGAAAGGACAGCAATATCTACAAG
AATACTCACTAAAATGCTACATAGAGCCAAGGTTTATTGCTTAACTAAAA
GATGAACCTGAGAGAGAACGGCTACTCATAGCTGGTCGGAGCACACAGAC
AAATGAGATGCTGGCCTACCCAGCGGTCAGGCTTGT

Query= MSMg01no179_e23.g1 MSMg01no179_e23.g1 CHROMAT_FILE:
MSMg01no179_e23.g1 PHD_FILE: MSMg01no179_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:17 2005
         (586 letters)



>mm_chr1_62401177_62402162
          Length = 986

 Score = 1087 bits (562), Expect = 0.0
 Identities = 582/592 (98%), Gaps = 6/592 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcacactgtcttctggactttgtgagcacct------acacacacacacacacacacaca 54
           |||||||||||||||||||||||||||||||      |||||||||||||||||||||||
Sbjct: 195 tcacactgtcttctggactttgtgagcacctacacacacacacacacacacacacacaca 254

                                                                       
Query: 55  cacacatctaaagataaatctttaaaaagtatttactttatttttcacaaaatgaatcat 114
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cacacatctaaagataaatctttaaaaagtatttactttatttttcacaaaatgaatcat 314

                                                                       
Query: 115 aaaagttttgttgtttcattttgttaacttgccaatttttttcaaattaagtctaacctt 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaaagttttgttgtttcattttgttaacttgccaatttttttcaaattaagtctaacctt 374

                                                                       
Query: 175 aatttctttaatatttttaaattcaggcagggtgacaccatagctatcacttcttttttt 234
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aatttctttagtatttttaaattcaggcagggtgacaccatagctatcacttcttttttt 434

                                                                       
Query: 235 tttcatcattactaccacaggtcttggctggaaatgcactctttatgagcagtgtggagc 294
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tttcatcattactaccgcaggtcttggctggaaatgcactctttatgagcagtgtggagc 494

                                                                       
Query: 295 ttggaatggaattagaaactagaggcagtaacatacagatattgacttccatgaaaccca 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ttggaatggaattagaaactagaggcagtaacatacagatattgacttccatgaaaccca 554

                                                                       
Query: 355 gtggtgtgatcgttgataacagttattcatttgcatgtaatacatctgaagttttgttag 414
           || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtagtgtgatcgttgataaaagttattcatttgcatgtaatacatctgaagttttgttag 614

                                                                       
Query: 415 tctgcacctgaacacaagaagagaaaattagcacaacgttgtgtgtggattgtgggcata 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tctgcacctgaacacaagaagagaaaattagcacaacgttgtgtgtggattgtgggcata 674

                                                                       
Query: 475 aagatttaaagaagtttatgagtgatagaaaggacagcaatatctacaagaatactcact 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aagatttaaagaagtttatgagtgatagaaaggacagcaatatctacaagaatactcact 734

                                                               
Query: 535 aaaatgctacatagagccaaggtttattgcttaactaaaagatgaacctgag 586
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aaaatgctacatagagccaaggtttattgcttaactaaaagatgaacctgag 786


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space:   562176
Effective search space used:   562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)