Query= MSMg01no179_l23.b1 MSMg01no179_l23.b1 CHROMAT_FILE:
MSMg01no179_l23.b1 PHD_FILE: MSMg01no179_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:50 2005
(601 letters)
>mm_chr1_155734312_155735312
Length = 1001
Score = 1122 bits (580), Expect = 0.0
Identities = 595/600 (99%), Gaps = 1/600 (0%)
Strand = Plus / Plus
Query: 3 gaattccaacttccatatca-tatacaaattcacttctgcttgcttgtcacctcattggt 61
||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattccaacttccagataaatatacaaattcacttctgcttgcttgtcacctcattggt 261
Query: 62 gacaatagtcacaaaggcggtatataggtgatttttattttttgaaaggaaagtaagtaa 121
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gacaatagtcacaaaggtggtatataggtgatttttattttttgaaaggaaagtaagtaa 321
Query: 122 aagtttatttagaagaaatgattcgggctggagagatggctcagcagttaagagcactaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aagtttatttagaagaaatgattcgggctggagagatggctcagcagttaagagcactaa 381
Query: 182 ctgctcttccagaggtcctgagttcaattcccagcaaccacatggtggctcacaaccatc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctgctcttccagaggtcctgagttcaattcccagcaaccacatggtggctcacaaccatc 441
Query: 242 tgcaatgaggtctgatgccctcttctggtgcttctgaatacagctacagtgtactcgtat 301
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 442 tgcaatgaggtctgatgccctcttctggtgcttctgaagacagctacagtgtactcgtat 501
Query: 302 acataagtaaatagatcttaaaaaaaaaaaaaagaaagaaagaaaagaaaagaaataatc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 acataagtaaatagatcttaaaaaaaaaaaaaagaaagaaagaaaagaaaagaaataatc 561
Query: 362 ccttgtaatcaggaggagagctggaaaaaaaaatcacctatgggtgatttgcagtgttct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ccttgtaatcaggaggagagctggaaaaaaaaatcacctatgggtgatttgcagtgttct 621
Query: 422 ttttgcttatatagtttcctggattttcctacagtgatggcacacaaagcaattttaaat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttttgcttatatagtttcctggattttcctacagtgatggcacacaaagcaattttaaat 681
Query: 482 tcaaataaggttcattcagaaggcaaaatgaagctttattttcccgatttgtcttcacac 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tcaaataaggttcattcagaaggcaaaatgaagctttattttcccgatttgtcttcacac 741
Query: 542 tcatttccccagcgtaccaaacttctcagcagccagaagcaatctgaattactgccatct 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tcatttccccagcgtaccaaacttctcagcagccagaagcaatctgaattactgccatct 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no179_l23.g1 MSMg01no179_l23.g1 CHROMAT_FILE:
MSMg01no179_l23.g1 PHD_FILE: MSMg01no179_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:50 2005
(235 letters)
>mm_chr1_155881114_155881748
Length = 635
Score = 449 bits (232), Expect = e-131
Identities = 232/232 (100%)
Strand = Plus / Minus
Query: 1 gtaagagccaggtcaggaggcaggaggctgactgagccacacagcggggcatgctcactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gtaagagccaggtcaggaggcaggaggctgactgagccacacagcggggcatgctcactg 373
Query: 61 tgcagggtgaggcagagctgtgtacacaagtcggaactgtggctagaaactaggggaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgcagggtgaggcagagctgtgtacacaagtcggaactgtggctagaaactaggggaaag 313
Query: 121 gccaccttgctgatttggatctgcgccaccacttcctgccccgacaaaaaggctgacgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gccaccttgctgatttggatctgcgccaccacttcctgccccgacaaaaaggctgacgtt 253
Query: 181 gttgatgtcgactggcctaacaaggaaaaaggacccatggatccacccaaga 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gttgatgtcgactggcctaacaaggaaaaaggacccatggatccacccaaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
