Query= MSMg01no179_n21.b1 MSMg01no179_n21.b1 CHROMAT_FILE:
MSMg01no179_n21.b1 PHD_FILE: MSMg01no179_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:59 2005
(319 letters)
>mm_chr1_161238773_161239491
Length = 719
Score = 601 bits (311), Expect = e-176
Identities = 317/319 (99%)
Strand = Plus / Minus
Query: 1 gcacaaatacaaaagcattactgtgaaaaggctgtacattcatttttccttcactcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 519 gcacaaatacaaaagcattactgtgaaaaggctgtacattcatttttccttcacttaaat 460
Query: 61 ggaaaaacagatttcttgttcaaattatttttttattcacaaagacttgcatgagtttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ggaaaaacagatttcttgttcaaattatttttttattcacaaagacttgcatgagtttca 400
Query: 121 ataaacaacttgcagagctgcactaaacagtttaaaggagtgagatcttctaagggaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ataaacaacttgcagagctgcactaaacagtttaaaggagtgagatcttctaagggaaaa 340
Query: 181 tagcaacgagtagtaccttttgcatcatcagaacctgaagccagaagtttaggatccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tagcaacgagtagtaccttttgcatcatcagaacctgaagccagaagtttaggatccatc 280
Query: 241 agattaaagtcaacactccaacaccttttttcatgctccttgatgtgaaagaaagatcag 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 279 agattaaagtcaacactccaacaccttttttcatgctccttgatgtgaaagaaagaccag 220
Query: 301 gggtgggagtggggtgggg 319
|||||||||||||||||||
Sbjct: 219 gggtgggagtggggtgggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no179_n21.g1 MSMg01no179_n21.g1 CHROMAT_FILE:
MSMg01no179_n21.g1 PHD_FILE: MSMg01no179_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:59 2005
(297 letters)
>mm_chr1_161129360_161130057
Length = 698
Score = 495 bits (256), Expect = e-144
Identities = 285/296 (96%), Gaps = 7/296 (2%)
Strand = Plus / Plus
Query: 1 aattcccaacaacaacaacatggtggctcacaaccatctgtagtataatctcgataccct 60
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||
Sbjct: 205 aattcccaacaacaacaacatggtggctcacaaccatctgtagtaaaatct-gatatcct 263
Query: 61 cttctggtatgtctgaagacagctacagtgtgctcatagaaactaactaactaaatcaat 120
|||||||||||||||||||||||||||||||||||||| ||||||| | | |||||||
Sbjct: 264 cttctggtatgtctgaagacagctacagtgtgctcataaaaactaaat--c--aatcaat 319
Query: 121 caatcaatctt-aaaaaaaaaactgataaagaaaattccattaaaggacaggtaggcaga 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caatcaatctttaaaaaaaaaactgataaagaaaattccattaaaggacaggtaggcaga 379
Query: 180 tttacaatcaaatgtagaaagattaattttcttttattaaattgacaaaaacatgtaggc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttacaatcaaatgtagaaagattaattttcttttattaaattgacaaaaacatgtaggc 439
Query: 240 atgtagactatctgggaaaaaa-aatattaaacaccttaacctaatggggttttaa 294
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 440 atgtagactatctgggaaaaaataatattaaacaccttaacctaatggggttttaa 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 698
Length adjustment: 9
Effective length of query: 288
Effective length of database: 689
Effective search space: 198432
Effective search space used: 198432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
