Query= MSMg01no181_g09.b1 MSMg01no181_g09.b1 CHROMAT_FILE:
MSMg01no181_g09.b1 PHD_FILE: MSMg01no181_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:51 2005
(631 letters)
>mm_chr1_78123680_78124710
Length = 1031
Score = 1158 bits (599), Expect = 0.0
Identities = 620/627 (98%)
Strand = Plus / Plus
Query: 5 gaattccaagtaaatccaagcctggcttagtgtttttcactctgtgttcaacagccaagg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagtaaattcaagcctggcttagtgtttttcactctgtgttcaacagccaagg 264
Query: 65 cctttggtgccaactggtaaacagggaagtgcccatagaacaccttaaataattgggagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctttggtgccaactggtaaacagggaagtgcccatagaacaccttaaataattgggagc 324
Query: 125 cagtttgacttgaatggtggcttcgatcaaatttgcttccaagtttcatggattagtgct 184
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 325 cagtttgacttgaatggtggcttaggtcaaatttgcttccaagtttcatggattagtgct 384
Query: 185 aattgtcccatggtgtgagcctaattttacccatcaataaatgacttgttcccatttttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aattgtcccatggtgtgagcctaattttacccatcaataaatgacttgttcccatttttt 444
Query: 245 tggttcctcctccaaggaagtctaacctacattattccagatgggttatttcaaatgcaa 304
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggttcctcctccaaggcagtctaacctacattattccagatgggttatttcaaatgcaa 504
Query: 305 tttgaaaaaatgggaaggaaaccataatactccatcctttgaaagagaattccacaggac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttgaaaaaatgggaaggaaaccataatactccatcctttgaaagagaattccacaggac 564
Query: 365 tgtaaaatgcctcattaaacaccagcttctgtgatgtgcactgctaccaggccaaggaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgtaaaatgcctcattaaacaccagcttctgtgatgtgcactgctaccaggccaaggaga 624
Query: 425 atccatgccaagtaggtaacttcaggacatatggctggttccctggaacctctcattcac 484
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 625 atccatgccaagtaggtaacttcaggacatatggctggttccctggaacctttcattcac 684
Query: 485 tcctatgtccttcttcttccaatgttctgctattcccggccctctctcccatcattgctg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 685 tcctatgtccttcttcttccaatgttctgctattcccggccctctctcccatcattgttg 744
Query: 545 ccacccagcctgtgtggagggaaagcaggcagaggaggactgccatgtcctcacaggtcc 604
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 745 ccacccagcctgtgtggagggaaagcaggcagaggaggactgccatgtcctcacgggtcc 804
Query: 605 acagacacatgtacacccagtcatggc 631
|||||||||||||||||||||||||||
Sbjct: 805 acagacacatgtacacccagtcatggc 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_g09.g1 MSMg01no181_g09.g1 CHROMAT_FILE:
MSMg01no181_g09.g1 PHD_FILE: MSMg01no181_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:51 2005
(505 letters)
>mm_chr1_78203572_78204476
Length = 905
Score = 781 bits (404), Expect = 0.0
Identities = 416/420 (99%), Gaps = 1/420 (0%)
Strand = Plus / Minus
Query: 1 caggctgtctgagctcttaggctgtcaatgccaggactctggacacgttctttgagtctt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 423 caggctgtctgagctcttaggctgtcaatgccaggactctgggcacgttctttgagtctt 364
Query: 61 aaaaaataagtcagaggctgaaactgggtaacagaggtcaaagaggtggcttgtcaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aaaaaataagtcagaggctgaaactgggtaacagaggtcaaagaggtggcttgtcaggtt 304
Query: 121 gtggtattggaaagaggatggagactcttctggagtccctactctgatgcttccataatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtggtattggaaagaggatggagactcttctggagtccctactctgatgcttccataatg 244
Query: 181 tctactctgttgttttatttattatgactcttgacttttgttgttagtgttgttgagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tctactctgttgttttatttattatgactcttgacttttgttgttagtgttgttgagaca 184
Query: 241 gggttccacatagcccaggttagcctcaaactcaatataaagcctagtttaaccttgagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gggttccacatagcccaggttagcctcaaactcaatataaagcctagtttaaccttgagc 124
Query: 301 tcttgatcctactggctctgcctccccagtgtatataccaccaggctagggctccagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 123 tcttgatcctactggctctgcctccccagtgtatataccaccaggctagggctccag-aa 65
Query: 361 cttcttcaagaagagatgttattcatatgtccttcacatgctattcacatacactcatta 420
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 cttctccaagaagaggtgttattcatatgtccttcacatgctattcacatacactcatta 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
