Query= MSMg01no181_i23.b1 MSMg01no181_i23.b1 CHROMAT_FILE:
MSMg01no181_i23.b1 PHD_FILE: MSMg01no181_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:03 2005
(595 letters)
>mm_chr1_96440954_96441948
Length = 995
Score = 849 bits (439), Expect = 0.0
Identities = 451/455 (99%)
Strand = Plus / Minus
Query: 5 gaattccaaacttcttcacatttaaacaactcccttttaagtcaatctagagattcattg 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 gaattccaaacttcttcaaatttaaacaactcccttttaagtcaatctagagattcattg 766
Query: 65 aaaattctactaaaatcccagaaatctctttgtagaaatttacaattcaattctaaaata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 aaaattctactaaaatcccagaaatctctttgtagaaatttacaattcaattctaaaata 706
Query: 125 aattgaaactgcaaggaatttatgataatgcaaataatttgacaaatttttaagccttaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aattgaaactgcaaggaatttatgataatgcaaataatttgacaaatttttaagccttaa 646
Query: 185 taccactattccttaaggaaatataaattaaacaaactatatgatactgttatgttagga 244
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 taccactgttccttaaggaaatataaattaaacaaactatatgatactgttatgttagga 586
Query: 245 actagaacaggtataatcgaaacaactagcaaattaatgtggcaaagatgtgggacaatt 304
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 actagaacaggtataatcaaaacaactagcaaattaatgtggcaaagatgtgggacaatt 526
Query: 305 agaaatacatatatattagtggagtcaactacataccattcaacaatcctactcctaaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 agaaatacatatatattagtggagtcaactacataccattcaacaatcctactcctaaga 466
Query: 365 atctagagaaattaaatatatgtcttcaaagacgtacacatggaattaacaacattgctc 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atctagagaaatgaaatatatgtcttcaaagacgtacacatggaattaacaacattgctc 406
Query: 425 aaaatagctacaatgtataaatacactagcattct 459
|||||||||||||||||||||||||||||||||||
Sbjct: 405 aaaatagctacaatgtataaatacactagcattct 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_i23.g1 MSMg01no181_i23.g1 CHROMAT_FILE:
MSMg01no181_i23.g1 PHD_FILE: MSMg01no181_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:03 2005
(331 letters)
>mm_chr1_96319519_96320244
Length = 726
Score = 601 bits (311), Expect = e-176
Identities = 325/331 (98%), Gaps = 5/331 (1%)
Strand = Plus / Plus
Query: 1 agaagaaagaaaatgaaaacaatagagttttatttaagcaaaatatgtttttttaaagaa 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 201 agaagaaagaaaatgaaaacaatagagttt-atttaagcaaaatatgtttttt-aaagaa 258
Query: 61 aggaattaaaaattattgtgttagataaatcagactcaaaaagtacaatttttatttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aggaattaaaaattattgtgttagataaatcagactcaaaaagtacaatttttatttcaa 318
Query: 121 ataaagatatatttttcatatatatggatatatatgttttcatacatgtctatataggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ataaagatatatttttcatatatatggatatatatgttttcatacatgtctatataggag 378
Query: 181 agacatgaaagcataatggagagtatttgaaaagggggacataggaaaaaataatagaga 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 379 agacataaaagcataatggagagtatttgaaaagggggacataggaaaaaata---gaga 435
Query: 241 agtgattatgagcaaattacaatgatatacacgtacggatgtatgtcatttcatctaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agtgattatgagcaaattacaatgatatacacgtacggatgtatgtcatttcatctaaaa 495
Query: 301 ctcttattttgtcttctaaaatattaatgga 331
|||||||||||||||||||||||||||||||
Sbjct: 496 ctcttattttgtcttctaaaatattaatgga 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 726
Length adjustment: 9
Effective length of query: 322
Effective length of database: 717
Effective search space: 230874
Effective search space used: 230874
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
