NAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGAGAAGAGGATCC
GCGGAATTCTTTGCCCATCCTACAGAATGAAGTCAGGTAACCTCACACCC
TAAGACAATGATGACATCATAGAAAGAAGTTGTAAATCAGAGACTCTTGG
ACTGTAACCACCATTCTTGCTTCATTGGTGAATCCTCAAAAGACCAAAAG
TCTGTGTCTTCAAATTATTTCAAATATCAAAACAGTAAGAGATCCTGGCT
CTGCCATTAAATGGCAACCTTTGAGCACTGGTCCTCTTCTTGCCCTCCTA
TTCTAAGAAACTGTGACAGCCACCAGAAAAGAACAGGCCCAGAGTGATCA
AAATGGAGGAAGTTCCCCTCCCATACCTGAGCTGTGCAAGGGGAGTAGTC
TGCTGGAGAGATTGCCACATCCTTGCTTTTGGAAACTATCTTGCATTGGA
CAAAATTGGAATGAGGGGAGGAAAGTGTTAGACCAAATTAAGAGGGTTCA
GATTGGTGCGATAGATCAATATGTACTATGAGGATGTACAAAATTGTCAA
AGATCAAATATTAATTAAAATGTTTTCTAACAGGTTGAAAGTGAAGAGGT
ACAACACTAACTACATATACCATGTCTACATCCATGTACACATTTCCATC
TTCCCCATCTAAAGTCCTGGAAATCTGGAAAACAGAAGACAAAGAAAGT

ACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGAGCCACATTTTAATGG
GGTTATTTGATTTTCTGAACCCCACCTTTTTGAGTTTTTTTTTTTAAGAA
CTTGAATGTTTTTATTAGATATTTACTTTATTTACATTTCTTTTTTTTCC
ATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAACA
GAGTTCTTTATGTATATTGGATATTACTCCCCTATCTGATTTAGGATAAG
TAAAGATCCATTTCAAATCTGTTGGCGGCCTTTTTATCTTATTGACAGTG
TCTTTTGCCTTACCGAAGCTTTGCAATTTTATGATGTCCCATTTGTCGAT
TCTCGATCTCACACCACCGGTCATTGCTGTTCTATTCAGAAAAATTTCCC
CTGCGCCCATATCTTCGAGGTTTTCCCCCTCTTTCTCCACAACAACTTTC
ACCGTTTCTGGCCCTATTATATTATCCCCCGATCTCTTTAGATTTGCCCT
CACCTTGGTGAGAACACAATGGATTTTCTTCCCCCCCTTTCCACTTGATA
ATTTGCCCCCCGTCGTTAACAATTTTTCTGGCGAAAAATGGTTGTTTATT
TTCCCCTCTGTAACACTTTTCCTCCCTTACTTCTCCTATTTTTCCTTTTT
CACCCTTTTTGTCAAACGGCGCTCCTGTTCTCACCCCCCCCTCTTTCCTT
CCN

Query= MSMg01no182_g18.b1 MSMg01no182_g18.b1 CHROMAT_FILE:
MSMg01no182_g18.b1 PHD_FILE: MSMg01no182_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:09 2005
         (635 letters)



>mm_chr1_124811683_124812717
          Length = 1035

 Score = 1154 bits (597), Expect = 0.0
 Identities = 618/625 (98%)
 Strand = Plus / Minus

                                                                       
Query: 11  gaattctttgcccatcctacagaatgaagtcaggtaacctcacaccctaagacaatgatg 70
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gaattctttgcctatcctacagaatgaagtcaggtaacctcacaccctaagacaatgatg 776

                                                                       
Query: 71  acatcatagaaagaagttgtaaatcagagactcttggactgtaaccaccattcttgcttc 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 acatcatagaaagaagttgtaaatcagagactcttggactgtaaccaccattcttgcttc 716

                                                                       
Query: 131 attggtgaatcctcaaaagaccaaaagtctgtgtcttcaaattatttcaaatatcaaaac 190
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 attggtgaatcctcaaaagaccaaaagtctgtgtcttcaaattatttcaaatatcaaaac 656

                                                                       
Query: 191 agtaagagatcctggctctgccattaaatggcaacctttgagcactggtcctcttcttgc 250
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 agtaagagatcctggctctgccattaaatggcaacctttgagcactggtcctcttcttgc 596

                                                                       
Query: 251 cctcctattctaagaaactgtgacagccaccagaaaagaacaggcccagagtgatcaaaa 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 cctcctattctaagaaactgtgacagccaccagaaaagaacaggcccagagtgatcaaaa 536

                                                                       
Query: 311 tggaggaagttcccctcccatacctgagctgtgcaaggggagtagtctgctggagagatt 370
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 535 tggaggaagttcccctcccatacctgagctgtgcaaggggagtggtctgctggagagatt 476

                                                                       
Query: 371 gccacatccttgcttttggaaactatcttgcattggacaaaattggaatgaggggaggaa 430
           |  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggtatatccttgcttttggaaactatcttgcattggacaaaattggaatgaggggaggaa 416

                                                                       
Query: 431 agtgttagaccaaattaagagggttcagattggtgcgatagatcaatatgtactatgagg 490
           |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 415 agtgttggaccaaattaagagggttcagattggtgtgatagatcaatatgtactatgagg 356

                                                                       
Query: 491 atgtacaaaattgtcaaagatcaaatattaattaaaatgttttctaacaggttgaaagtg 550
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 atgtacaaaattgtcaaagatcaaatattaattaaaatgttttctaacaggttgaaagtg 296

                                                                       
Query: 551 aagaggtacaacactaactacatataccatgtctacatccatgtacacatttccatcttc 610
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aagaggtacaacactaactacatataccatgtctacatccatgtacacatttccatcttc 236

                                    
Query: 611 cccatctaaagtcctggaaatctgg 635
           |||||||||||||||||||||||||
Sbjct: 235 cccatctaaagtcctggaaatctgg 211


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space:   640625
Effective search space used:   640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)