Query= MSMg01no184_a23.b1 MSMg01no184_a23.b1 CHROMAT_FILE:
MSMg01no184_a23.b1 PHD_FILE: MSMg01no184_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:16 2005
(437 letters)
>mm_chr1_166227693_166228530
Length = 838
Score = 743 bits (384), Expect = 0.0
Identities = 402/408 (98%), Gaps = 1/408 (0%)
Strand = Plus / Plus
Query: 16 ggaattcaggtacttcagcctcagcctcccaagtcttgaattttatatataggtctgcat 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ggaattcaggtacttcagcctcagcctcccaagtcttgaattttatatataggtctgcat 275
Query: 76 cattatggccagccctaaacaagcgcttcccttgaagcactgcctcagttgcttctaaaa 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cattatggccagccctaaacaagcgcttcccttgaagcactgcctcagttgcttctaaaa 335
Query: 136 aaattccgtactttgacatattatggctcagacacttggcttctacc-aaactacacaaa 194
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 336 aaattccgtactttgacatattatggctcagacacttggcttctaccaaaactacacaaa 395
Query: 195 tcgccttaaccacactcaggaactgctttgaaatgcagaaatgccctcagttacagatgt 254
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ccaccttaaccacactcaggaactgctttgaaatgcagaaatgccctcagttacagatgt 455
Query: 255 aataattcttctccccattagcaacgtaagatgtaacaccaccatcctttctgtttttag 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aataattcttctccccattagcaacgtaagatgtaacaccaccatcctttctgtttttag 515
Query: 315 ggtttcttcctctcagggcatctattttaaagggaggcttagagtatacagtagtcttta 374
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 516 ggtttcttcctctcagggcatctattttaaagggaggcttagagtatacagtagtcggca 575
Query: 375 tgttaacaaacgtggccacactcaaacactcaaataaaacctttcata 422
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tgttaacaaacgtggccacactcaaacactcaaataaaacctttcata 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 838
Length adjustment: 9
Effective length of query: 428
Effective length of database: 829
Effective search space: 354812
Effective search space used: 354812
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_a23.g1 MSMg01no184_a23.g1 CHROMAT_FILE:
MSMg01no184_a23.g1 PHD_FILE: MSMg01no184_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:16 2005
(278 letters)
>mm_chr1_166363995_166364672
Length = 678
Score = 485 bits (251), Expect = e-142
Identities = 272/279 (97%), Gaps = 2/279 (0%)
Strand = Plus / Minus
Query: 1 agtattctaaagggcgtgttgcaactatcacatttacagcttgctccaccgcagagccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 agtattctaaagggcgtgttgcaactatcacatttacagcttgctccaccgcagagccca 419
Query: 61 gtataaatgtggatagataagatcaggagtcctacagtaagcctgttgtttccaagggct 120
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 418 gtataaatgtggatagataagatcaggagtcctacaggcagcctgttgtttccaagggct 359
Query: 121 ggctccaatatgagccatggaggaggcggcatggggaacctgacactccggcacagctcc 180
|||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 358 ggctccaatatgggccacggaggaggcggcatggggaatctgacactccggcacagctcc 299
Query: 181 taatggggttttattgggcctgtcttttgggttaagtgttgcggattgcttccatt-cct 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 298 taatggggttttattgggcctgtcttttgggttaagtgttgcggattgcttccattccct 239
Query: 240 gtgactggaacatattacctgtcaatactctttgatgtc 278
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 -tgactggaacatattacctgtcaatactctttgatgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
