Query= MSMg01no184_h09.b1 MSMg01no184_h09.b1 CHROMAT_FILE:
MSMg01no184_h09.b1 PHD_FILE: MSMg01no184_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:50 2005
(314 letters)
>mm_chr1_51085320_51086033
Length = 714
Score = 522 bits (270), Expect = e-152
Identities = 297/308 (96%), Gaps = 4/308 (1%)
Strand = Plus / Minus
Query: 7 aattcctcaaacaaacaaacaaacaaacaaacaaacaaaacacaacaaaaaaaccccatt 66
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 564 aattcct----caaacaaacaaacaaacaaagaaacaaaacacaacaaaaaaaccccatt 509
Query: 67 attttaaacataatttttttgctcagtttttataactgaaatacatttggggatttttaa 126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 cttttaaacataatttttttgctcagtttttataactgaaatacatttggggatttttaa 449
Query: 127 aataattaaactgagtagaacttaatttttttcttatcatactaaacaaacatctatgct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 aataattaaactgagtagaacttaatttttttcttatcatactaaacaaacatctatgct 389
Query: 187 atacactcaaaatcagtgaactctggtggctagaatcactggcagagaatctaccagcaa 246
||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 388 atatactcaaaagcagtgaactctggtggctagaatcactggcagagaatctaccagcga 329
Query: 247 gattttgtcatccttcacagaaatgccaggaactgaaggaattttaagaatactatacat 306
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 328 gattttgtcatccttcacagaaatgccaggaactgaaggaattttaagaataatatgcat 269
Query: 307 gattgtat 314
||||||||
Sbjct: 268 gattgtat 261
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no184_h09.g1 MSMg01no184_h09.g1 CHROMAT_FILE:
MSMg01no184_h09.g1 PHD_FILE: MSMg01no184_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:50 2005
(657 letters)
>mm_chr1_50987874_50988929
Length = 1056
Score = 1263 bits (653), Expect = 0.0
Identities = 656/657 (99%), Gaps = 1/657 (0%)
Strand = Plus / Plus
Query: 1 atatgagcacatagagcctcatgttgaatcgtaagcagaacggtggacattgtcatctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatgagcacatagagcctcatgttgaatcgtaagcagaacggtggacattgtcatctgt 260
Query: 61 cagagaggttttcaacagttagaaagaaaagtatatttttacaaagaagttatcatcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagagaggttttcaacagttagaaagaaaagtatatttttacaaagaagttatcatcaaa 320
Query: 121 gttgttaaaatgaatttaaaataatgcttccattgttgttattacaatcattatttatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgttaaaatgaatttaaaataatgcttccattgttgttattacaatcattatttatcc 380
Query: 181 catttgccactatgaaaattactggagtctgcttcttttcaaaatattcatataataata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttgccactatgaaaattactggagtctgcttcttttcaaaatattcatataataata 440
Query: 241 tatagcctcaaataacttggatgttgaactagtaccgtggactcacacttgattattatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatagcctcaaataacttggatgttgaactagtaccgtggactcacacttgattattatt 500
Query: 301 gaattacatttaacaccaaacatttacatctaatttaagctgatgcaagaaatatgcata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaattacatttaacaccaaacatttacatctaatttaagctgatgcaagaaatatgcata 560
Query: 361 taaataaaactatgaacaagatcaaaggcacttccaaaattataaaagcatgagttgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaataaaactatgaacaagatcaaaggcacttccaaaattataaaagcatgagttgttg 620
Query: 421 aaaactagaaacacaaagtcatattttgacttactgtaccatattgaatattgacttaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaactagaaacacaaagtcatattttgacttactgtaccatattgaatattgacttaat 680
Query: 481 ggtgaatacataggacttaaccctacatcttggtgaggcagataagaaaactcaccttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggtgaatacataggacttaaccctacatcttggtgaggcagataagaaaactcaccttta 740
Query: 541 aatatgggttgagatacttttagagaagataaaagctccttgtgcatttttttcctcctt 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 741 aatatgggttgagatacttttagagaagataaaagctccttgtgcatttttt-cctcctt 799
Query: 601 tttgagaaacagagcaagattattggtagcttaaagtggccaaagacattgccatgg 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tttgagaaacagagcaagattattggtagcttaaagtggccaaagacattgccatgg 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1056
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1046
Effective search space: 676762
Effective search space used: 676762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
