GTTGGCATATATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCGCGGAATTCTAATGCATAAAATATTTTATAGATGTCTGCTAT
TTTTATTTGACTCTTGTACTATTTAATTAGAGTTAAATAGATTTAATCTT
TGTAGGAACATTTTATTGGCAAAAGTAGGGTACTGAACTCACCCAACACC
ACTGGGTAAGGGACAAAATGTAATTTGAACTATGGTTGAATTTTTTTTTC
ATTAACATTAGTGCCCTTGTATTTGATACATAAATGTTTAGAACTTCAAT
ATCATCTTGGTGGATTTTTCTTTTAATGAGTATGGTGTGTTCTTCCCTAT
CTCCTCTGATTAGATTTGGTTTGAAATACACCCCCCCCGCTATTAAAATA
GCCAAATTTGTTTGTAACTTGCCCACCACCCATTTGAAATATCTTTTTCC
ATTCTTTTACCCTAAGGTGGTGTCTGCCCTTAATAGTCATATGTCTTCTG
TGCTGTACCAGATATATGAACTCCGTTTCTAATGCATCCTGTTAGCCTAT
GACCTCCACCGTGCTTTTGAGACCACTATCCGTTTATAGCTCCCTTCTTA
ATCACAGTATCATAATTCCTCCTTAATTTCGCCTCAATAGCTAACGAATA
TCCTATATTTCCAACTTTTCTTTTCCCCTTTTCTACCCCCTCCCATTTAT
TTTTTTTCTCCCCCCTTCCTACACTACTTATTCTCTATCCCCTCCCAACT
TTTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTTTGATGGCTTTGCCTAGGCTCTA
TTTTGTTTGTTTGTTTTAGGAGAGGGGCTTATATGATTATTTCTAAGGCA
CCTCTTTACAATTGCTTTTTAAATTTTCTGAATGAGAGTTAGCTCCTATT
TTCAAAACAAAACAAAGCAAGAAAAGGAGTCATAGCTACTTCTAACAGTG
CTTCAAATTCCTCCAAACCTTCTCATATACTGCTCACTGTTCTCCTTCCC
ATTCATAGTCTCCTTTTATATCTGTTGTCATATGTACAAATGCATATGCA
TATACAGCTAGATTCCTGAGCATAACATGCGCAGTCTGTGCAACGTCACT
TGTAAATGTGATTCTAACAAATGTGACCATTTGTTATTGGATAATCAAAT
GATGTGTTCTCTGGGGAAGAGTATTTCTCTATCCCTTATTTGCCTATAGT
TCTTTGTGTAGGGTAAAAGTCTCTTTCCCACCCACCTACTTTGTCATGTA
TATTTCTGCTGTTCAGCTCATATTCAGACAGTCATATCGATGAGACCTCG
GTGTAGCTTTTAAAATTACTACGATACACAATCTCACAGCAGACTCCCTG
ATCCTTTCATTTTTACAATCCTTCCATAGCTTCTTCTGCAGTGTTCCCTA
AAGTGTTAGGTTTGGGAACTGTCTTTGAN

Query= MSMg01no184_h11.g1 MSMg01no184_h11.g1 CHROMAT_FILE:
MSMg01no184_h11.g1 PHD_FILE: MSMg01no184_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:51 2005
         (615 letters)



>mm_chr1_30427087_30428101
          Length = 1015

 Score =  861 bits (445), Expect = 0.0
 Identities = 520/557 (93%), Gaps = 22/557 (3%)
 Strand = Plus / Minus

                                                                       
Query: 51  gggcttatatgattatttctaaggcacctctttacaattgctttttaaattttctgaatg 110
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gggc-tatatgattatttctaaggcacctctttacaattgctttttaaattttctgaatg 492

                                                                       
Query: 111 agagttagctcctattttcaaaac------------aaaacaaagcaagaaaaggagtca 158
           ||| ||||||||||||||||||||            ||||||||||||||||||||||||
Sbjct: 491 agaattagctcctattttcaaaacaaaacaaaacaaaaaacaaagcaagaaaaggagtca 432

                                                                       
Query: 159 tagctacttctaacagtgcttcaaattcctccaaaccttctcatatactgctcactgttc 218
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 431 tagctacttctaacagtgcttccaattcctccaaaccttctcatatactgctcactgttc 372

                                                                       
Query: 219 tccttcccattcatagtctccttttatatctgttgtcatatgtacaaatgcatatgcata 278
           ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 371 tccttcccattcatagtctccttttatatttgttgtcacatgtacaaatgcatatgcata 312

                                                                       
Query: 279 tacagctagattcctgagcataacatgcgcagtctgtgcaacgtcacttgtaaatgtgat 338
           |||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||||| |
Sbjct: 311 tacagccagattcctaagcataacatgcccagcctgtgcaacgtcacttgtaaatgtgtt 252

                                                                       
Query: 339 tctaacaaatg---tgaccatttgttattggataatcaaatgatgtgttctctggggaag 395
           | ||      |   ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 251 ttta------gggctgaccatttgttattggataatcaactgatgtgttctctggggaag 198

                                                                       
Query: 396 agtatttctctatcccttatttgcctatagttctttgtgtagggtaaaagtctctttccc 455
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 197 agtatttctctatcccttatttgcctatagttctttgcgtagggtaaaagtctccttccc 138

                                                                       
Query: 456 acccacctactttgtcatgtatatttctgctgttcagctcatattcagacagtcatatcg 515
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 137 acccacctactttgtcatgtatatttctgctgttcagctcatatttagacagtcatatcg 78

                                                                       
Query: 516 atgagacctcggtgtagcttttaaaattactacgatacacaatctcacagcagactccct 575
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 77  atgagacctcggtgtagcttttaaaattactacgatacacaatctcacagcaaactccct 18

                            
Query: 576 gatcctttcatttttac 592
           |||||||||||||||||
Sbjct: 17  gatcctttcatttttac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space:   608025
Effective search space used:   608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)