Query= MSMg01no185_a14.b1 MSMg01no185_a14.b1 CHROMAT_FILE:
MSMg01no185_a14.b1 PHD_FILE: MSMg01no185_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:38 2005
(225 letters)
>mm_chr1_60470568_60471192
Length = 625
Score = 426 bits (220), Expect = e-124
Identities = 223/224 (99%)
Strand = Plus / Plus
Query: 1 aattgtggccactcaatttgttggctagccctgggttcacttgagagaccttgcctcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattgtggccactcaatttgttggctagccctgggttcacttgagagaccttgcctcagt 260
Query: 61 gaagaaggtgtggcattcacaaacaaaacaagtacggaataaacttagtacagactctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagaaggtgtggcattcacaaacaaaacaagtacggaataaacttagtacagactctac 320
Query: 121 tgcctgacttctatgcctttgttccttttctccacttattaatgtaagcatgtaatgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcctgacttctatgcctttgttccttttctccacttattaatgtaagcatgtaatgcct 380
Query: 181 aataccttataaaatgttcaggaattccatttatttatttatga 224
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 aataccttagaaaatgttcaggaattccatttatttatttatga 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no185_a14.g1 MSMg01no185_a14.g1 CHROMAT_FILE:
MSMg01no185_a14.g1 PHD_FILE: MSMg01no185_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:39 2005
(343 letters)
>mm_chr1_60620273_60621015
Length = 743
Score = 613 bits (317), Expect = e-180
Identities = 337/345 (97%), Gaps = 3/345 (0%)
Strand = Plus / Minus
Query: 2 cctgggttttatacttagcacaaaaccaaagtctgacttgtatgcttgaagtcaggagca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cctgggttttatacttagcacaaaaccaaagtctgacttgtatgcttgaagtcaggagca 291
Query: 62 ttacattgaaatcagagcatataaaaagctaaggcagaagggttaaggctagcttaggtt 121
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttacattgaaatcagagcatatgaaaagctaaggcagaagggttaaggctagcttaggtt 231
Query: 122 atatattgaggtcctgactcacaaaaatgttttaaaattataatattaaaaaactgttac 181
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 230 atatattgaggtcctgactcacaaaaatgttttaaaattataataataaaaaactgttac 171
Query: 182 taaatactttgtactactttgagtgcttcctatgtattgaattatttattccttaccatg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 taaatactttgtactactttgagtgcttcctatgtattgaattatttattccttaccatg 111
Query: 242 cctct---aagaaggtttcgttaatctagaaaacaagcagaagtagtaagttactttctt 298
||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 110 cctctaagaagaaggtctcattaatctagaaaacaagcagaagtagtaaattactttctt 51
Query: 299 aaagattgcacagctctatagtaaacagctatttaaaactaggca 343
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 aaagattgcacagctctatagtaaacagctatttaaaactaggca 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
