Query= MSMg01no186_b07.b1 MSMg01no186_b07.b1 CHROMAT_FILE:
MSMg01no186_b07.b1 PHD_FILE: MSMg01no186_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:58 2005
(526 letters)
>mm_chr1_51209001_51209921
Length = 921
Score = 934 bits (483), Expect = 0.0
Identities = 512/523 (97%), Gaps = 5/523 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagagagcatcttatttatatgtagatgtagctatatgacattttcaaatgcca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggaattcagagagcatcttatttatatgtagatgtagctatatgacattttcaaatgcca 662
Query: 64 gacatttgcatatgaaggtctctttcttcccctttcagtaaacagtctttcctattactt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gacatttgcatatgaaggtctctttcttcccctttcagtaaacagtctttcctattactt 602
Query: 124 ccaaagcaatgttcggaattaaattccctataaaagtttgttcttaaagtgtttttaaat 183
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccaaagcaatgttcagaattaaattccctataaaagtttgttcttaaagtgtttttaaat 542
Query: 184 gtccagaagagatgagaaattaaactcccaaactggaatccattagttttttttcttttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 541 gtccagaagagatgagaaattaaactcccaaactggaatccattagttttttt-cttttt 483
Query: 244 cttttttgaggagttaaaaaaaaagtatctataaatttatgatacacacacctatacatc 303
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 482 cttttttgaggagttaaaaaaaa-gtatctataaatttatgatacacacacctatacatc 424
Query: 304 ttctgtttgtgtagcttttcacaaaaaaattttgaaattttattaatacaggtaaaaatg 363
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 423 ttctgtttgtgtagcttttcacaaaaaatttttgaaattttattaatacaggtaaaaatg 364
Query: 364 tcataagaggaccacaagaggaggttacttttatatgaggacttgttctgcttctagagc 423
||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 363 tcataagaggaaaacaagaggaggttacttttatatgaggactt---ctgcttctagagc 307
Query: 424 aatgacccctggtcttgatggaatagttgtaaggtgctgaccatgcatcaggcgcttttc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aatgacccctggtcttgatggaatagttgtaaggtgctgaccatgcatcaggcgcttttc 247
Query: 484 taggtgccacgtttataatagggaacaggatggttttcctgcc 526
|||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 246 taggtgccacatttataatagggaacaggatggctttcctgcc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 921
Length adjustment: 10
Effective length of query: 516
Effective length of database: 911
Effective search space: 470076
Effective search space used: 470076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_b07.g1 MSMg01no186_b07.g1 CHROMAT_FILE:
MSMg01no186_b07.g1 PHD_FILE: MSMg01no186_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:58 2005
(297 letters)
>mm_chr1_51063776_51064472
Length = 697
Score = 567 bits (293), Expect = e-166
Identities = 296/297 (99%)
Strand = Plus / Plus
Query: 1 acagcagttgagagagaatgcacagaaactctgtagactcagatcagacaaaaatcacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagcagttgagagagaatgcacagaaactctgtagactcagatcagacaaaaatcacag 260
Query: 61 catggagggtaaggatggacacaaagacccacttctacagaaggagcaatcgagaactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catggagggtaaggatggacacaaagacccacttctacagaaggagcaatcgagaactaa 320
Query: 121 caggtactgggtgaggcagagacagttttctttaaggatgtgaatcatggtgggtcgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggtactgggtgaggcagagacagttttctttaaggatgtgaatcatggtgggtcgaca 380
Query: 181 caagttcaaagcatatacggaaagaatgagctgtacatgatgggtttaaatcaaaagggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagttcaaagcatatacggaaagaatgagctgtacatgatgggtttaaatcaaaagggg 440
Query: 241 gcgaaattttgtgataaggaaaaataggagaagttggcaaaagggatgaatatgatc 297
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 gcgaaattttgtgataaggaaaaataggagaagttggcaaaagggatgaatacgatc 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
