Query= MSMg01no186_c04.b1 MSMg01no186_c04.b1 CHROMAT_FILE:
MSMg01no186_c04.b1 PHD_FILE: MSMg01no186_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:02 2005
(524 letters)
>mm_chr1_14695619_14696542
Length = 924
Score = 915 bits (473), Expect = 0.0
Identities = 503/513 (98%)
Strand = Plus / Plus
Query: 5 gaattctttcaactcacagcctgaattgatcttcgcagtgaccttgagagacaaatcacc 64
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 205 gaattctttcaactcacagcctggattgatcttcgcagtgaccttgaaagacagatcacc 264
Query: 65 tctgctattcaacacttgcagatacatctctacagttcggcttcctgcagattgcccagg 124
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 265 tctgctattcaacacttgcagattcatctctacagttcggcttcctgcagattgtccagg 324
Query: 125 cactgtggctttgttggagccgtcccaacaaggctaaggcaagattgagctatttttgga 184
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 325 cactgtggctttgttggagccatcccaacaaggctaaggcaagattgagctattttggga 384
Query: 185 gatgaattggtttgcagtcaatattttgatgggggttacagaatgcaagaggctactttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatgaattggtttgcagtcaatattttgatgggggttacagaatgcaagaggctactttc 444
Query: 245 ttaactattagaaaatgccatgcaagctgtaagtagaaaccaatatatttgacaccatgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttaactattagaaaatgccatgcaagctgtaagtagaaaccaatatatttgacaccatgt 504
Query: 305 aacaacttcaaatttgttgtttaaactcttccgctttcttaacaaaactgagccaaatcc 364
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 505 aacaacttcaaatttgttgtttaaactcttctgttttcttaacaaaactgagccaaatcc 564
Query: 365 aggatttggggattgacctcaaatggttcccagtaatggaaattggaaatgaaagaaaca 424
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 aggatttggggattgacctcaaatggttcccagcaatggaaattggaaatgaaagaaaca 624
Query: 425 gaaggaaacaacataaaggccatgaaaaccaacttgatttaaataaagcccttggacaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaaggaaacaacataaaggccatgaaaaccaacttgatttaaataaagcccttggacaga 684
Query: 485 gtgctttcttttattgctttcacgttttttttt 517
|||||||||||||||||||||||||||||||||
Sbjct: 685 gtgctttcttttattgctttcacgttttttttt 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_c04.g1 MSMg01no186_c04.g1 CHROMAT_FILE:
MSMg01no186_c04.g1 PHD_FILE: MSMg01no186_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:02 2005
(571 letters)
>mm_chr1_14883242_14884212
Length = 971
Score = 538 bits (278), Expect = e-157
Identities = 308/318 (96%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 255 ggcttcatgtcttttctagttcatgagcccc-gatgaaggaatgatgctactcactccta 313
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 971 ggcttcatgtcttttctagttcatgagcccctgatgaaggaatgatgttactcactccta 912
Query: 314 caatgggttgagtccttctacaactcagtaatcacaacaatttcccacagacatgcccac 373
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 911 caatgggttgagtccttctacaactcaataatcagaacaatttcccacagacatgcccac 852
Query: 374 agatgaacctgaactagacagttcaccaatagaaatgctcttctgggttgtgtcaagata 433
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 851 agatgaacctgaactagacagttgaccaatataaatgctcttctgggttgtgtcaagata 792
Query: 434 ataattaaaattaccattacttcttatttgtttagagagcactgaaatgtatatttcctc 493
||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||
Sbjct: 791 ataattaaaattaccattacttcttatttttttagagagcactaaaatgtacatttcctc 732
Query: 494 aagaaataattgatataggccatcatggtttctgtttctatttttaaagacatgtttata 553
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aagaaataattgagataggccatcatggtttctgtttctatttttaaagacatgtttata 672
Query: 554 tggggaaatgacaaacca 571
||||||||||||||||||
Sbjct: 671 tggggaaatgacaaacca 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
