Query= MSMg01no188_h16.b1 MSMg01no188_h16.b1 CHROMAT_FILE:
MSMg01no188_h16.b1 PHD_FILE: MSMg01no188_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:09 2005
(316 letters)
>mm_chr1_192900679_192901394
Length = 716
Score = 553 bits (286), Expect = e-162
Identities = 304/310 (98%)
Strand = Plus / Minus
Query: 5 gaattctccaggactccagcaccagattggaaattcactgaaccttggcctttctgctgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaattctccaggactccagcaccagattggaaattcactgaaccttggcctttctgctgg 563
Query: 65 gagtcagccatagttgaactacctggcccatagtctgtgggctgctctcggaacactcac 124
||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||
Sbjct: 562 gagtcagccatagttgaactacccggcccagagtctgtgggccgctctcggaacactcac 503
Query: 125 ctgtactcgctctctcatactgaccccactgattgtcccctcagagcctcctaatacagc 184
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 502 atgtactcgctctctcatactgaccccactgattgttccctcagagcctcctaatacagc 443
Query: 185 aacagaacatgaatgtctctgtgtgcatcggccagctttacaatgctccgatgagcccac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aacagaacatgaatgtctctgtgtgcatcggccagctttacaatgctccgatgagcccac 383
Query: 245 tttagggtgcactcgtgtgcatgaggttcttctcttctctgcatgaatagtgacttaaag 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 382 tttagggtgcactcgtgtgcatgaggttcttctcttctctgcatggatagtgacttaaag 323
Query: 305 ttccagtaac 314
||||||||||
Sbjct: 322 ttccagtaac 313
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no188_h16.g1 MSMg01no188_h16.g1 CHROMAT_FILE:
MSMg01no188_h16.g1 PHD_FILE: MSMg01no188_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:09 2005
(290 letters)
>mm_chr1_192796049_192796740
Length = 692
Score = 484 bits (250), Expect = e-141
Identities = 281/292 (96%), Gaps = 2/292 (0%)
Strand = Plus / Plus
Query: 1 tctgtccaacaaacactagcaattgtggagacttccttgttttttcacaccaacacccac 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tctgtccaacaaacactagcaattgtggagacttccttgttttttcacagtaacacccac 260
Query: 61 atgtctaacaaacctctgtaagaaccgaccagaggtttcagagaggtgagaaaagaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtctaacaaacctctgtaagaaccgaccagaggtttcagagaggtgagaaaagaaagt 320
Query: 121 aggccgaggaacagccttccttagcatctccatatggtaagctttaggcaggtatagagc 180
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 aggcggaggaacagccttccttagcatctccatatggtaagctataggcaggtatagagc 380
Query: 181 aggaagcacgggagcagggaaggaagggagagaggga--aatcccatcagagaagagtgg 238
||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 381 aggaagcacgggagcagggaaggaagggagagagggataaatcccatcagagaaaagtgg 440
Query: 239 agaggcgagggacaggacgtgagagagagttcttgcacgcgtagccagtgac 290
||||| ||||||| |||| |||||||||||||||||||| ||||||||||||
Sbjct: 441 agaggtgagggacgggacctgagagagagttcttgcacgtgtagccagtgac 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 692
Length adjustment: 9
Effective length of query: 281
Effective length of database: 683
Effective search space: 191923
Effective search space used: 191923
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
