Query= MSMg01no189_k24.b1 MSMg01no189_k24.b1 CHROMAT_FILE:
MSMg01no189_k24.b1 PHD_FILE: MSMg01no189_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:43 2005
(320 letters)
>mm_chr1_121405693_121406411
Length = 719
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaaggctcagcacaccaggctcacatgtacccaaggttggaatggaggacttgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaggctcagcacaccaggctcacatgtacccaaggttggaatggaggacttgg 264
Query: 65 gggatgagggtgagaaccaggctggagttgggggtgatctcagtagaaggtgcccgtgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggatgagggtgagaaccaggctggagttgggggtgatctcagtagaaggtgcccgtgct 324
Query: 125 gctccccttgggctctgagctccatcctcagcaccgtgtagcaagaagcataaggaaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctccccttgggctctgagctccatcctcagcaccgtgtagcaagaagcataaggaaaaa 384
Query: 185 gccagtgtcagagggagagaggctcaagggaactggattccatccgtggaagcccagaat 244
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gccagtgttagagcgagagaggctcaagggaactggattccatccgtggaagcccagaat 444
Query: 245 gggagcccacaaggaaaatcaaagtcctgtgcagtccatcttctctacccatactcaagg 304
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gggagcccacaag-aaaatcaaagtcctgtgcagtccatcttctctacccatactcaagg 503
Query: 305 caacccggatggcaag 320
||||||||||||||||
Sbjct: 504 caacccggatggcaag 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_k24.g1 MSMg01no189_k24.g1 CHROMAT_FILE:
MSMg01no189_k24.g1 PHD_FILE: MSMg01no189_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:43 2005
(287 letters)
>mm_chr1_121522098_121522786
Length = 689
Score = 543 bits (281), Expect = e-159
Identities = 287/291 (98%), Gaps = 4/291 (1%)
Strand = Plus / Minus
Query: 1 caggacatccagggctacatagacccaggggttcaggcatccctccctatatgccctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 caggacatccagggctacatagacccaggggttcaggcatccctccctatatgccctgaa 392
Query: 61 aatacaagtatctgttttagatcttttaactatttgctttcattttttaattgctatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aatacaagtatctgttttagatcttttaactatttgctttcattttttaattgctatatt 332
Query: 121 atgcttctgtcatatttaaatgttttgtccagtctgttattagattgttctcttggattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atgcttctgtcatatttaaatgttttgtccagtctgttattagattgttctcttggattt 272
Query: 181 ttcttatggaattccttgcaggaaaatctttgtacatttatttctgaattagacatgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttcttatggaattccttgcaggaaaatctttgtacatttatttctgaattagacatgatg 212
Query: 241 t----ccccccccatttatttatttttatgtatgtgagtacactgtagctg 287
| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tgtccccccccccatttatttatttttatgtatgtgagtacactgtagctg 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 689
Length adjustment: 9
Effective length of query: 278
Effective length of database: 680
Effective search space: 189040
Effective search space used: 189040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
