Query= MSMg01no191_a11.b1 MSMg01no191_a11.b1 CHROMAT_FILE:
MSMg01no191_a11.b1 PHD_FILE: MSMg01no191_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:29 2005
(323 letters)
>mm_chr1_39868266_39868988
Length = 723
Score = 590 bits (305), Expect = e-173
Identities = 313/316 (99%)
Strand = Plus / Plus
Query: 5 gaattcctggaatctacataaagccagagacagtagggcaccactgcaccactggcattc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctggaatctacataaagccagagacagtagggcaccactgcaccactggcattc 264
Query: 65 ctacctggagcctgaagagacagagtttcctaaggctcacaggccagctagcctggagga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctacctggagcctgaagagacagagtttcctaaggctcacaggccagctagcctggagga 324
Query: 125 cgcacaaggaaacacggcaccctgtctcaaacagggtggaggtgaaggccaatacctgca 184
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 325 cgcacaaggaaacacggcaccctgtctcaaacacggtggaggtgaaggccaatacctgca 384
Query: 185 gctgtcccccgagctccacgggtgtgccatgatgtgtgtgtccacacatagattaaaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctgtcccccgagctccacgggtgtgccatgatgtgtgtgtccacacatagattaaaata 444
Query: 245 aattccaaatttcaccaatctcaggtagcgtttattactgtatattgttactattattct 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 aattccaaatttcaccaatctcaggtagcgtttattacagtatattgttactattattct 504
Query: 305 caaggtggnttgattt 320
|||||||| |||||||
Sbjct: 505 caaggtggtttgattt 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_a11.g1 MSMg01no191_a11.g1 CHROMAT_FILE:
MSMg01no191_a11.g1 PHD_FILE: MSMg01no191_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:29 2005
(244 letters)
>mm_chr1_39958542_39959185
Length = 644
Score = 387 bits (200), Expect = e-112
Identities = 228/242 (94%), Gaps = 8/242 (3%)
Strand = Plus / Minus
Query: 1 acattttataatccccacactgtaattcctcctgttcccgtggtccaaaagcacactcgc 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 499 acattttataatccccacactgtaattcctcctgttcccgtggcccaaaagcacact--- 443
Query: 61 cgccccccccccccgcttccccaagatactgtccactagaacagggtatgctggccaagc 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 -----cccccgcccgcttccccaagatactgtccactagaacagggtatgctggccaagc 388
Query: 121 tttaaaatcagtaccaggtaacgctagcctccccaagttggagcctatggcaagcactcc 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 387 tttaaaatcagtaccaggtaacgctagcctccccaagttggagcctacggcaagcactcc 328
Query: 181 gaaggcaaaatcacgatgacaagtctcaagaataccaaggcagtggctgagtggagtcat 240
||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaaggcagaagcacgatgacatgtctcaagaataccaaggcagtggctgagtggagtcat 268
Query: 241 ag 242
||
Sbjct: 267 ag 266
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
