Query= MSMg01no191_e21.b1 MSMg01no191_e21.b1 CHROMAT_FILE:
MSMg01no191_e21.b1 PHD_FILE: MSMg01no191_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:51 2005
(318 letters)
>mm_chr1_140890708_140891425
Length = 718
Score = 594 bits (307), Expect = e-174
Identities = 310/311 (99%)
Strand = Plus / Plus
Query: 5 gaattctctgctaactagagaaacattgagtcaggcttatttgcgaacatgtagcagggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgctaactagagaaacattgagtcaggcttatttgcgaacatgtagcagggc 264
Query: 65 aggaccactccgcccttatcacttgaagagatacagttgctgtaccgaatgagaatcaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggaccactccgcccttatcacttgaagagatacagttgctgtaccgaatgagaatcaaa 324
Query: 125 tttgacctaaacttggtttgttttatttatttctttacctatttatttatgatcgtttgt 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttgacctaaatttggtttgttttatttatttctttacctatttatttatgatcgtttgt 384
Query: 185 ttgagacggggtcttatatttagcctttgctgatctggaacttgctctgtagaccagttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgagacggggtcttatatttagcctttgctgatctggaacttgctctgtagaccagttt 444
Query: 245 cccctggaactcacagagatctgcctgtctctgcctcctgaattctaggatcaaaggtat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cccctggaactcacagagatctgcctgtctctgcctcctgaattctaggatcaaaggtat 504
Query: 305 gtgccacccca 315
|||||||||||
Sbjct: 505 gtgccacccca 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_e21.g1 MSMg01no191_e21.g1 CHROMAT_FILE:
MSMg01no191_e21.g1 PHD_FILE: MSMg01no191_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:51 2005
(279 letters)
>mm_chr1_140988313_140988990
Length = 678
Score = 412 bits (213), Expect = e-119
Identities = 252/279 (90%), Gaps = 23/279 (8%)
Strand = Plus / Minus
Query: 1 ccattacgctgagccttcaaaggcttgtctccaggatcgagctaagtacactctacagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ccattacgctgagccttcaaaggcttgtctccaggatcgagctaagtacactctacagat 357
Query: 61 ttcagtatcatggagagaaaggctaagttcctctctccctctccggtaaacaccccttcc 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttcaatatcatggagagaaaggctaagttcctctctccctctccggtaaacaccccttcc 297
Query: 121 tcctaaagcgtaagagtaggaaatgtgcacagcctaagaagaatggttagaaaagctgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tcctaaagcgtaagagtaggaaatgtgcacagcctaagaagaatggttagaaaagctgca 237
Query: 181 atgctgttttcgtaatgtcactatctagggaaatacttggatggatttctcaacgcatag 240
|||||||||||||||||||||||||||||| |||||| |
Sbjct: 236 atgctgttttcgtaatgtcactatctaggg-aatact----------------------g 200
Query: 241 agaatccatcccagcagtctgcacaactccataaagaag 279
|||| |||||||||||| |||||||||||||| ||||||
Sbjct: 199 agaacccatcccagcagcctgcacaactccatgaagaag 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 678
Length adjustment: 9
Effective length of query: 270
Effective length of database: 669
Effective search space: 180630
Effective search space used: 180630
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
