Query= MSMg01no192_n20.b1 MSMg01no192_n20.b1 CHROMAT_FILE:
MSMg01no192_n20.b1 PHD_FILE: MSMg01no192_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:50 2005
(417 letters)
>mm_chr1_131605476_131606292
Length = 817
Score = 609 bits (315), Expect = e-178
Identities = 369/409 (90%), Gaps = 36/409 (8%)
Strand = Plus / Minus
Query: 5 gaattcctagtgtctatttctctccactttcttctctctgtccttcctactgtctcttat 64
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 396 gaattcctagtgtctatttctctccactttcttctctctgtccctcctactgtctcttat 337
Query: 65 acataaagccataggggtgtggcttcaaaatactaggccactgtattttccaacctatac 124
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 336 acataaagtcataggggtgtggcttcaaaatactaggcctctgtattttccaacctatac 277
Query: 125 tgaagcatatcaataaccctagactcagaatatactctgaaaagagccatacatgtccat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgaagcatatcaataaccctagactcagaatatactctgaaaagagccatacatgtccat 217
Query: 185 tgccaaaagagtatgcacacacacacacacacacacacaccatacatgcatgcatacata 244
||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 216 tgccaaaagagtatg------------cacacacacacaccatacatgcatgcataca-- 171
Query: 245 catacatacttacatacatacatacttacatacatacatacatacactgctaggatattg 304
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 170 ----------tacatacatacatact------------tacatacactgctaggatattg 133
Query: 305 aaaaacatatcaagatcaaacacagaaattccatgtgaaatcttatcttaatttacgtgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 132 aaaaacatatcaagatcaaacacagaaattccatgtgaaatcttatcttaacttacgtgt 73
Query: 365 gaaatgtatcttaacttacaaacactcagttgttattttctgttctttt 413
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gaaatgtatcttaacttacaaacactcagttgttattttctgttctttt 24
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_n20.g1 MSMg01no192_n20.g1 CHROMAT_FILE:
MSMg01no192_n20.g1 PHD_FILE: MSMg01no192_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:50 2005
(377 letters)
>mm_chr1_131510973_131511749
Length = 777
Score = 690 bits (357), Expect = 0.0
Identities = 372/377 (98%)
Strand = Plus / Plus
Query: 1 atgcaggggagtatcattacccatagaagccagagagggcattggatcctttggaggtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgcaggggagtatcattacccatagaagccagagagggcattggatcctttggaggtct 260
Query: 61 tatttcaggtggttgtgagctgtctgatgtaagttctgggaactggactcaggtcctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttcaggtggttgtgagctgtctgatgtaagttctgggaactggactcaggtcctctg 320
Query: 121 caagaacagtacattaataagcactgagccatctctacagctccagactccttagatttt 180
||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 caaaaacagtacactcataagcactgagccatctctacagctccagactccttagattct 380
Query: 181 tatttccctacacttcaggagcacagcagcatgcactgcacgatcccttacatattaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatttccctacacttcaggagcacagcagcatgcactgcacgatcccttacatattaacc 440
Query: 241 acatagaactcagtgcatgttgtccattttacagccacctctcataacactgattcacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatagaactcagtgcatgttgtccattttacagccacctctcataacactgattcacag 500
Query: 301 agaatgattggcttgcagatgatataactaggatctctttctatttcagggctggatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaatgattggcttgcagatgatataactaggatctctttctatttcagggctggatata 560
Query: 361 catgtaatcagacttta 377
|||| ||||||||||||
Sbjct: 561 catgcaatcagacttta 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
