Query= MSMg01no198_g04.b1 MSMg01no198_g04.b1 CHROMAT_FILE:
MSMg01no198_g04.b1 PHD_FILE: MSMg01no198_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:36 2005
(581 letters)
>mm_chr1_149633672_149634650
Length = 979
Score = 1048 bits (542), Expect = 0.0
Identities = 569/578 (98%), Gaps = 4/578 (0%)
Strand = Plus / Minus
Query: 5 gaattctgctttgtgtcactcagatatacagaaaatcaatacaggggagatccatgacac 64
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 779 gaattctgctttgtgtcactcagatatacagaaaatcaatacaggggacatccatgacac 720
Query: 65 tttttcaaaagtgtgacacatacatcataacgttagtttctttgttaatgccctcgctga 124
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 719 tttttcaaaagtgtga-acatacatcataacattagtttctttgttaatgccctcgctga 661
Query: 125 ctaactaacaattacaaccagtcacttaatttgaaaataagtagattatggagagaaatg 184
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ctaactaa-aattacaaccagtcacttaatttgaaaataagtagattatggagagaaatg 602
Query: 185 taagttatgcttggagtgggtagacagagaattaagaaggcatgctgctcatcagaatag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taagttatgcttggagtgggtagacagagaattaagaaggcatgctgctcatcagaatag 542
Query: 245 ttttaacatgttgcagtattgaaaatgtaaatgacaatttattttgattaaagttctata 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctttaacatgttgcagtattgaaaatgtaaatgacaatttattttgattaaagttctata 482
Query: 305 gcattt-cccctgataatgatatgtattttaagaattgttatgggaaggtaattccagtc 363
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcattttcccctgataatgacatgtattttaagaattgttatgggaaggtaattccagtc 422
Query: 364 catgttctgattttcaaacataatatttaaatctgaataagtagaaaaaaaagatgaaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 421 catgttctgattttcaaacataatatttaaatctgaataagtagaaaaaaa-gatgaaaa 363
Query: 424 agttgatcctgtataagtatgtctcataacctgttgttgactgatgcctggtggataact 483
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 362 agttgatcctgtataagtatgtctcataacctgttgttgacagatgcctggtggataact 303
Query: 484 tgatgaatcattactgtgatggtgttatttttttgcattcaggtcatgtatatgcttttc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgatgaatcattactgtgatggtgttatttttttgcattcaggtcatgtatatgcttttc 243
Query: 544 aataatgctagcattatgttttctccagtcttttttca 581
||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aataatgctagcattatgttttctccagtcttttttca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 979
Length adjustment: 10
Effective length of query: 571
Effective length of database: 969
Effective search space: 553299
Effective search space used: 553299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no198_g04.g1 MSMg01no198_g04.g1 CHROMAT_FILE:
MSMg01no198_g04.g1 PHD_FILE: MSMg01no198_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:36 2005
(290 letters)
>mm_chr1_149600680_149601369
Length = 690
Score = 514 bits (266), Expect = e-150
Identities = 278/282 (98%)
Strand = Plus / Plus
Query: 1 agatgttaataaatgaaaatgtctttggctgttagtgtacaaaactggaaaaccaaaact 60
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 agatgttaataaatgaaaatatctttggctgttagtgtgcaaaactggaaaaccaaaact 260
Query: 61 ctgatcatttagatgaaactcaatatcaaattgagacatatctcggtgttagtgtacgtt 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgatcatttagatgagactcaatatcaaattgagacatatctcggtgttagtgtacgtt 320
Query: 121 ctcaacatacaaggatacctgagtttcatctacaacactggagagaacaaaagttcattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcaacatacaaggatacctgagtttcatctacaacactggagagaacaaaagttcattt 380
Query: 181 gaagatcaacaaaagacaaagagctaagctagtgatgttctccataagataatgtgcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagatcaacaaaagacaaagagctaagctagtgatgttctccataagataatgtgcaaa 440
Query: 241 aaactccaacatgcttattggcagctgatataactcctggga 282
|||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 aaactccaacatgcatattggcagctgatataactcctggga 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
