Query= MSMg01no198_g16.b1 MSMg01no198_g16.b1 CHROMAT_FILE:
MSMg01no198_g16.b1 PHD_FILE: MSMg01no198_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:38 2005
(311 letters)
>mm_chr1_51002390_51003100
Length = 711
Score = 540 bits (279), Expect = e-158
Identities = 300/307 (97%)
Strand = Plus / Plus
Query: 5 gaattctgagttatcaccattgaaataataaatgttctgaaaattttagcaatatgaata 64
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgagttataatctttgaaataataaatgttctgaaaattttagcaatatgaata 264
Query: 65 aaagttttaaatcggaagcaaaactgggacattggccaaattgcttttctcctgactcat 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaagttttaaattggaagcaaaactgggacattggccaaattgcttttctcctgactcat 324
Query: 125 aagttattgtattctatggcactaacaagtctgaattttacttaaactcttaaatagatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagttattgtattctatggcactaacaagtctgaattttacttaaactcttaaatagatt 384
Query: 185 agtaactccaatgacaaaatatactcaagctcagatctcatagcctttgggttgttaaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtaactccaatgacaaaatatactcaagctcagatctcatagcctttgggttgttaaag 444
Query: 245 ttggatttggcttactgattctaatatgtttataattggactgactttttaataagagat 304
|||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 445 ttggatttggcttactgactctaatatgcttagaattggactgactttttaataagagat 504
Query: 305 ccaaaaa 311
|||||||
Sbjct: 505 ccaaaaa 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no198_g16.g1 MSMg01no198_g16.g1 CHROMAT_FILE:
MSMg01no198_g16.g1 PHD_FILE: MSMg01no198_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:38 2005
(288 letters)
>mm_chr1_51113488_51114175
Length = 688
Score = 493 bits (255), Expect = e-144
Identities = 277/291 (95%), Gaps = 12/291 (4%)
Strand = Plus / Minus
Query: 1 ttaatgcatatctgtatttttagatcagataaaatgagtaagaagttctttccctgaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttaatgcatatctgtatttttagatcagataaaatgagtaagaagttctttccctgaaaa 426
Query: 61 atatagagtgtgactcaaagaaaatgataatgaaatgaaatacttaaggccttgtgaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atatagagtgtgactcaaagaaaatgataatgaaatgaaatacttaaggccttgtgaagt 366
Query: 121 attaataagcagcaactaaatttgtctgtatgcttgaatctctaattttgtgtctctgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 attaataagcagcaactaaatttgtctgtatgcttgaatctctaattttgtgtctctgaa 306
Query: 181 gtggtggtctgatgaggctgggcccacgcacgcaggcagcgatttttggatggaagagta 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 305 gtggtggtctgatgaggctgggcccacgcatgcaggcagcgatttttggatggaagagta 246
Query: 241 aagggg------gttttttaactgactgcatgaggtagtgcctggtgacta 285
|||||| | |||||||||||||||||||| |||||||||||
Sbjct: 245 aagggggcaaaag------aactgactgcatgaggtagtacctggtgacta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
