Query= MSMg01no198_h12.b1 MSMg01no198_h12.b1 CHROMAT_FILE:
MSMg01no198_h12.b1 PHD_FILE: MSMg01no198_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:42 2005
(316 letters)
>mm_chr1_3260128_3260843
Length = 716
Score = 588 bits (304), Expect = e-172
Identities = 310/312 (99%)
Strand = Plus / Minus
Query: 4 ggaattcctttcttcctgaaaaccctcgtttccaggccctgtggagtgatcaaaggttat 63
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 377 ggaattcctttcttcctgaaaaccctcatttccaggccctgtggagtgatcaaaggttat 318
Query: 64 ctctcattcaccactgctacagaaaccaaaactcttcttacccaacttttccatacccca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctctcattcaccactgctacagaaaccaaaactcttcttacccaacttttccatacccca 258
Query: 124 agttaaaggtcttcttgattatgaagtaaatatttttcttatggtaaacctaattgtcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agttaaaggtcttcttgattatgaagtaaatatttttcttatggtaaacctaattgtcaa 198
Query: 184 cttgacataacctagagtcttctgagaggaaaagcctcccttgaggaattatctagtttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cttgacataacctagagtcttctgagaggaaaagcctcccttgaggaattatctagtttg 138
Query: 244 gattggcttgtgggtaacagagaatatcctgaataatggtaatactgtagaggaaataaa 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 137 gattggcttgtgggtaacagagaatatcctgaaaaatggtaatactgtagaggaaataaa 78
Query: 304 aaaaaaatcagg 315
||||||||||||
Sbjct: 77 aaaaaaatcagg 66
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no198_h12.g1 MSMg01no198_h12.g1 CHROMAT_FILE:
MSMg01no198_h12.g1 PHD_FILE: MSMg01no198_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:42 2005
(284 letters)
>mm_chr1_3160290_3160973
Length = 684
Score = 520 bits (269), Expect = e-152
Identities = 282/289 (97%), Gaps = 5/289 (1%)
Strand = Plus / Plus
Query: 1 tgtgttttgttggcaaagttagaagcggtaggctcaagacttgcatcctgtatttccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgttttgttggcaaagttagaagcggtaggctcaagacttgcatcctgtatttccagg 260
Query: 61 ctgtcttatattactagtcattctccatgtccactttcttgcttctagcaattcaacaaa 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 ctgtcttatattactagtcattctccatgtccattttcttgcttctagcaattcaacaaa 320
Query: 121 atgaaatcaaagacaaaacaaaacaaaacaa-----cacaaaacacctgaaagtggcatt 175
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 321 atgaaatcaaagacaaaacaaaacaaaacaaaacaacacaaaatacctgaaagtggcatt 380
Query: 176 tctactaacatcaaaaaattaagggagttgtatggtctttttagttgacatctgcaccca 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctactaacatcaaaaaattaagggagttgtatggtctttttagttgacatctgcaccca 440
Query: 236 ggagctggttctcttccacagtcctctgtacacaggtccagccagtagt 284
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagctggttctcttccacagtcctctgtacacaggtccagccagtagt 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
