Query= MSMg01no202_p18.b1 MSMg01no202_p18.b1 CHROMAT_FILE:
MSMg01no202_p18.b1 PHD_FILE: MSMg01no202_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:59 2005
(233 letters)
>mm_chr1_119322185_119322817
Length = 633
Score = 402 bits (208), Expect = e-117
Identities = 226/232 (97%)
Strand = Plus / Minus
Query: 1 ccataaatagggtgatttcttgcatcttctaagaactctgtcgtgatgggattatttgtt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ccataaatagggtgatttcttgcatcttctaagaactctgtcgtgatgggattatttgtc 373
Query: 61 tcagtaatcacaaagtccattccatggtatggaaaataagagaatatctaggaatagcag 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 372 tcagtaatcacaaagtccattccatggtatggaaaataagtgaatatctaggaatagcag 313
Query: 121 aaggagaatatacagacttggcaaccataacaggctcactgaagcaagcaagagctctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaggagaatatacagacttggcaaccataacaggctcactgaagcaagcaagagctctgt 253
Query: 181 tcaggctgtttggtttcctagagctggaatttgccaagccaaatctgggtta 232
|||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcaggctggttggggccctagagctggaatttgccaagccaaatctgggtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no202_p18.g1 MSMg01no202_p18.g1 CHROMAT_FILE:
MSMg01no202_p18.g1 PHD_FILE: MSMg01no202_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:59 2005
(287 letters)
>mm_chr1_119200952_119201638
Length = 687
Score = 505 bits (261), Expect = e-147
Identities = 280/287 (97%), Gaps = 2/287 (0%)
Strand = Plus / Plus
Query: 1 actggcaaaaaaaaaaa--gagcaatttccaatcttttgttatctgctccttaaggactg 58
||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||
Sbjct: 199 actggcaaaaaaaaaaaaagagcaatttccaatcttttgttatctgttgtttaaggactg 258
Query: 59 ttttaaactgtgactgaatgaagtcagtgtgagagtgatacaatgaataattgcagctga 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttttaaactgtgactgaatgaagtcagtgtgagagtgatacaatgaataattgcagctga 318
Query: 119 tgggtcttaggcttccatggttggaagacattgttgtgttttggcatgtgacaacatgtg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgggtcttaggcttccatggttggaagacattgttgtgttttggcatgtgacaacatgtg 378
Query: 179 tcactttgtttacatccagacaggaacactgtgctgtgtgcttagagcacagcaaagcaa 238
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcactttgtttacatccagacagaaacactgtgctgtgtgcttagagcacagcaaagcaa 438
Query: 239 atgcaggtttcttcacagcaagggatcctatgggtgtacttttttaa 285
||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 439 atgcaggtttcttcacagcaagggatcctatgggtgtgcttttttaa 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
