Query= MSMg01no203_m22.b1 MSMg01no203_m22.b1 CHROMAT_FILE:
MSMg01no203_m22.b1 PHD_FILE: MSMg01no203_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:06 2005
(118 letters)
>mm_chr1_38044081_38044593
Length = 513
Score = 165 bits (85), Expect = 1e-45
Identities = 101/107 (94%), Gaps = 5/107 (4%)
Strand = Plus / Plus
Query: 10 gaattcagaccctcccagctaatttaaagtatgtttctctcaagttatacacaatggact 69
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 210 gaattcagaccctcccaggtaatttaaagtatgtttctctcaagttatacacaatg-act 268
Query: 70 gcagacaaaatggtcaaacacgtggtacaggctggggaataagagtg 116
|||||||||||||||||||| ||| ||||||||||| |||||||||
Sbjct: 269 gcagacaaaatggtcaaaca-gtg-tacaggctggg--ataagagtg 311
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 513
Length adjustment: 8
Effective length of query: 110
Effective length of database: 505
Effective search space: 55550
Effective search space used: 55550
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no203_m22.g1 MSMg01no203_m22.g1 CHROMAT_FILE:
MSMg01no203_m22.g1 PHD_FILE: MSMg01no203_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:06 2005
(287 letters)
>mm_chr1_38165552_38166238
Length = 687
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%)
Strand = Plus / Minus
Query: 1 tttgtccttagaatgacttaactggttttctagtccctaagcctaaagcttgaaacagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttgtccttagaatgacttaactggttttctagtccctaagcctaaagcttgaaacagcc 428
Query: 61 atgatttggtaatcttggtgttgtgtggtacagttgattttaaatgttgctttaagaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atgatttggtaatcttggtgttgtgtggtacagttgattttaaatgttgctttaagaaca 368
Query: 121 ccagatctattaatctgttatcaagataatcattcccctatgatgcattcttttaatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ccagatctattaatctgttatcaagataatcattcccctatgatgcattcttttaatgaa 308
Query: 181 cttcttagggagacattttgtaggacagatgtgtcatactgtgtgtgcattcttgagtgg 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 307 cttcttagggagacactttgtaggacagatgtgtcatactgtgtgtgcattcttgcgtgg 248
Query: 241 ctagtgtgactcattttaagagccatcctaggtcagatgatgaaggg 287
||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 247 ctagtgtgactcagtttaagagccatcctaggtcagatgatgaaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
