CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTAAACCTGACCAACAGCTTCAGTGAAGTAGCTGGATATAACATTA
ACTCAAACAAGTCCATGGTTCTTCTCTACACAAAGAATAAACAGGCTGAG
AAAGAAATTAGGGAAGCAACACCCTTCTCAATAGTCACAAATAATTTAAA
ATATCTTGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAA
ATTTCAAATCCCTGAAGAAAGAAATTAAAGAATATCTCAGAAGATGGAAA
TATCTCCCATGCTCATGGATTGGCAGGATCAATATAGCAAAAATGGCTAT
CTTGCCAACAGCAATCTCCAGTTCAATGCAATCCCTATCAAAATTCCAAC
TCAATTCTTCAACGAACCACCAAGGGCAATCGGCAGATTCATCTGGAATA
ACAGTAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCAT
GCCTGACCTAAAGCTGTACTGCAGAGCAATTGTGATTAAAAACTGCATGG
TACTGGTATAGCAACAGACCAATGGAACAGAATAAAAGACCCAGAGATGA
AACCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAACCATC
CAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGCA
GTTATCATGTAGAAGAATGTGAATTGATCCATTCCTATA

CGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTATTCAGCTATAAAGAAAAATGAA
ATTTTCAGGAAATGAATGCAAGTAGGAAAAATTATATTGAGTGAAATAAC
TATGTGCAGAAAGTCAAACATTACATGTTCCCTTTCCTATGTGAATCATG
GATTTGATATTTTTAGATTTGTTTTATTTTTTAATTAGAATTCCTTTAGA
GTCCTGAAACATATACAGGGGCTATGGCTTGGAGAAGGCAGAGTTCTTAA
GTAGAGTGGTGTTGAGATAGTAATAAAAGTGTTGTACAAAAATAGAAGCA
GTGACAAGATTGAAAAAGAGATATAGATAGAAAATATGGGAGTATAAGAG
TATATCTGATTTTTAAAAAACACCCAAAATGATGTTGGATAATGTTCATT
TCAGAACACATAAATTATCACATGAAAATCCCAATGTCAGGAGTTGTTGG
CAAAGAAATACTTAGAGGCTCCCAAAGTGTTATATGTCATTGACATTGAC
ATTGATTATTCACCAAAACTAGGAGATATGACATGATTGTTGCAAAGGCT
CTCATATTGTGGTGGTAGAATATATATAAACCATGCTAGAACAGAGATAG
ATGTCTACCTATTGCTACCTAGCATTCATAATGCCCTAAGTTATTATGCT
GATATAGAGAACAAAGGTCAACAAGTTGTGCGGATCTCCC

Query= MSMg01no206_a18.g1 MSMg01no206_a18.g1 CHROMAT_FILE:
MSMg01no206_a18.g1 PHD_FILE: MSMg01no206_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:05 2005
         (555 letters)



>mm_chr1_148815873_148816826
          Length = 954

 Score =  973 bits (503), Expect = 0.0
 Identities = 542/555 (97%), Gaps = 1/555 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tattcagctataaagaaaaatgaaattttcaggaaatgaatgcaagtaggaaaaattata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattcagctataaagaaaaatgaaattttcaggaaatgaatgcaagtaggaaaaattata 260

                                                                       
Query: 61  ttgagtgaaataactatgtgcagaaagtcaaacattacatgttccctttcctatgtgaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagtgaaataactatgtgcagaaagtcaaacattacatgttccctttcctatgtgaat 320

                                                                       
Query: 121 catggatttgatatttttagatttgttttattttttaattagaattcctttagagtcctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 catggatttgatatttttagatttgttttattttttaattagaattcctttagtgtcctg 380

                                                                       
Query: 181 aaacatatacaggggctatggcttggagaaggcagagttcttaagtagagtggtgttgag 240
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 aaacatatacaggggctatggcttggagaagacagagttcttaagtagagtggtgttgag 440

                                                                       
Query: 241 atagtaataaaagtgttgtacaaaaatagaagcagtgacaagattgaaaaagagatatag 300
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 atagtaataaaagtgttgta-aaaaatagaagcagtgacaagattgaaaaagagatctag 499

                                                                       
Query: 301 atagaaaatatgggagtataagagtatatctgatttttaaaaaacacccaaaatgatgtt 360
           |||||||||||||| ||||||||||||||||||||||||||||| |   ||||||||| |
Sbjct: 500 atagaaaatatgggggtataagagtatatctgatttttaaaaaatatttaaaatgatgat 559

                                                                       
Query: 361 ggataatgttcatttcagaacacataaattatcacatgaaaatcccaatgtcaggagttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggataatgttcatttcagaacacataaattatcacatgaaaatcccaatgtcaggagttg 619

                                                                       
Query: 421 ttggcaaagaaatacttagaggctcccaaagtgttatatgtcattgacattgacattgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 620 ttggcaaagaaatacttagaggctcccaaagtgttatatgtcattgacattgacattgag 679

                                                                       
Query: 481 tattcaccaaaactaggagatatgacatgattgttgcaaaggctctcatattgtggtggt 540
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 680 tattcaccaaaactaggagatatgacatgattgttgtaaaggctctcatattgtggtggc 739

                          
Query: 541 agaatatatataaac 555
           |||||||||||||||
Sbjct: 740 agaatatatataaac 754


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space:   514480
Effective search space used:   514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)