Query= MSMg01no213_j23.b1 MSMg01no213_j23.b1 CHROMAT_FILE:
MSMg01no213_j23.b1 PHD_FILE: MSMg01no213_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:42 2005
(300 letters)
>mm_chr1_166507706_166508405
Length = 700
Score = 495 bits (256), Expect = e-144
Identities = 292/318 (91%), Gaps = 22/318 (6%)
Strand = Plus / Minus
Query: 1 tctaataccccagtgcaacacctacaacctacatgtaccatttactctcccaagtaccct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 350 tctaataccccagtgcaacacctacaacctacatgtaccatttactctcccaagtagcat 291
Query: 61 ctgatacactatagcaagggacctgggtgtaagcttcaactaactgtgctagaattttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ctgatacactatagcaagggacctgggtgtaagcttcaactaactgtgctagaattttag 231
Query: 121 ctttcaaaccggattttttttttttttttt----------------------gtatctgc 158
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 230 ctttcaaaccggattttttttttttttttttttttttttttttttttttttggtatctgc 171
Query: 159 acaagtttggtaggagggagaaggtcagagagcatagaggaggaggaagcaaagagaagg 218
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 170 acaagtttggtaggagggagaaggtcagagagcagagaggaggaggaagcagagagaagg 111
Query: 219 gtggatgttggcctagtgttgaagagacacaggactttacaacagcttactgattagata 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gtggatgttggcctagtgttgaagagacacaggactttacaacagcttactgattagata 51
Query: 279 gatagatagatagataga 296
||||||||||||||||||
Sbjct: 50 gatagatagatagataga 33
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_j23.g1 MSMg01no213_j23.g1 CHROMAT_FILE:
MSMg01no213_j23.g1 PHD_FILE: MSMg01no213_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:42 2005
(207 letters)
>mm_chr1_166373333_166373939
Length = 607
Score = 346 bits (179), Expect = e-100
Identities = 200/207 (96%)
Strand = Plus / Plus
Query: 1 gggaggcgccaaacgcaggcgttccccgcacaaacacgcttccctcgacactcattccca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 gggaggcgccaaacgcaggcgttccccgcacaaacacgcttccctcgccactcattccca 260
Query: 61 cttggctcatgggatggattaaatccccactcccctggtgaattcaatccgatggcattt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttggctcacgggatggattaaatccccactcccctggtgaattcaatccgatggcattt 320
Query: 121 acattaggtattgaactgtagcgatagtgatgtaatatcgaatgtcatccagtttccttg 180
| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agattaggtatcgaactgtatcgatagtgatgtaatatcgaatgtcatccagtttccttg 380
Query: 181 tcaacacttcacagtagcattaacctg 207
|||||| |||||||||||||||||||
Sbjct: 381 gcaacacgtcacagtagcattaacctg 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
