Query= MSMg01no214_c21.b1 MSMg01no214_c21.b1 CHROMAT_FILE:
MSMg01no214_c21.b1 PHD_FILE: MSMg01no214_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:25 2005
(191 letters)
>mm_chr1_82654261_82654851
Length = 591
Score = 369 bits (191), Expect = e-107
Identities = 191/191 (100%)
Strand = Plus / Minus
Query: 1 catatcctggtcctcctagccatcccagtacaggaacaaaaagcaatccatgtccaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 catatcctggtcctcctagccatcccagtacaggaacaaaaagcaatccatgtccaaaag 332
Query: 61 gacatggagtagtgttcttagtgaagactaggtgaggttacagtggccatgcaaagggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gacatggagtagtgttcttagtgaagactaggtgaggttacagtggccatgcaaagggtc 272
Query: 121 ccattagattgtagtgctcctctactctgcctgtgggtcactgccatcctattggatcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccattagattgtagtgctcctctactctgcctgtgggtcactgccatcctattggatcag 212
Query: 181 agccacacata 191
|||||||||||
Sbjct: 211 agccacacata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 591
Length adjustment: 8
Effective length of query: 183
Effective length of database: 583
Effective search space: 106689
Effective search space used: 106689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no214_c21.g1 MSMg01no214_c21.g1 CHROMAT_FILE:
MSMg01no214_c21.g1 PHD_FILE: MSMg01no214_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:25 2005
(544 letters)
>mm_chr1_82534607_82535550
Length = 944
Score = 977 bits (505), Expect = 0.0
Identities = 537/551 (97%), Gaps = 8/551 (1%)
Strand = Plus / Plus
Query: 1 atgactgaagagaaaatggatggctctagtagtgccaaaaagaaacctcttgggagggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atgactgaagagaaaatggatggctctagtagtgccaaaaagaaacctcttgggagggtt 254
Query: 61 taagaaaatatttaaatagcaaaggggaaaagctgaaagacaaccatacatagaaagtga 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 255 taagaaaatatttaaatagcaaaggagaaaagctgaaagacaaccatacatagaaagtga 314
Query: 121 aacttgtttcctaagg----gaattaattaattaattaattaatattttcttatttattt 176
|||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aacttgattcctaagggaaagaattaattaattaattaattaatattttcttatttattt 374
Query: 177 atctatttaatataaataatattttatacattttattttataaattcttatattttataa 236
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 375 atctatttaatataaataatattttataaattttattttataaattcttatattttataa 434
Query: 237 attttgtaactaacatataaaatatataaagcat---ataatatataaatgatataaaca 293
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 435 attttgtaactaacatataaaatatataaagcatataataatatataaatgatataaaca 494
Query: 294 ataattttttatttaaatttttctcaatttttattagttctttgagaatttcttaacagt 353
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ataa-tttttatttaaaattttctcaatttttattagttctttgagaatttcttaacagt 553
Query: 354 gcattttgactcaggccaaatcacttctgatttttactcaacggagagagctggacaggt 413
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 554 gcattttgactcaggccaaatcacttctgatttttactcaagggagagagctggacaggt 613
Query: 414 gggtggtgagaataagggatgccccttgtagaagctatctttaaataacaaactcatcct 473
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 614 gggtggtgagaataagggatgccccttgtagaagctatcttcaaataacaaactcatcct 673
Query: 474 gagtagtgggattgtaagttttggtaaactgcctcctcctttaacttcatgcaggagcaa 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gagtagtgggattgtaagttttggtaaactgcctcctcctttaacttcatgcaggagcaa 733
Query: 534 gaactgcctta 544
|||||||||||
Sbjct: 734 gaactgcctta 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
