Query= MSMg01no216_i01.b1 MSMg01no216_i01.b1 CHROMAT_FILE:
MSMg01no216_i01.b1 PHD_FILE: MSMg01no216_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:32 2005
(697 letters)
>mm_chr1_150710242_150711338
Length = 1097
Score = 1183 bits (612), Expect = 0.0
Identities = 658/684 (96%), Gaps = 19/684 (2%)
Strand = Plus / Minus
Query: 29 gcacccacaattatgtgcacaaacatatgaatgtgtgtgcgtgtgttttgtg-------- 80
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 gcacccacaattatgtgcacaaacatatgaatgtgtgtgcgtgtgttttgtgtgtgtgtg 1038
Query: 81 ---cccgtgtgtatcatagatgtt-----ttttaagttcttatttatttttgaaacatgg 132
|||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1037 tgt---gtgtgtatcatagatgtttttgattttaagttcttatttatttttgaaacatgg 981
Query: 133 tctctcattgtagatggtatcaaattcagacttctttgcctcacctctaatctgggatta 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 tctctcattgtagatggtatcaaattcagacttctttgcctcacctctaatctgggatta 921
Query: 193 aaaatatgcaccactctgcctggcgaagtccatggaattttagtagtcctgtgcattgaa 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 aaaatatgcaccactctgcctggcgaagtccatggaattttagtagtcctgtgcattgaa 861
Query: 253 gttaatcaatgtggtatttcacctcttttactaaatgttgctaattcaatagaaatcaat 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gttaatcaatgtggtatttcacctcttttactaaatgttgctaattcaatagaaatcaat 801
Query: 313 agatgcttcagtttagattttatgttaacctagattacagaaatgacaatgaacttatca 372
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 800 agatgcttcagtttagattttatgttaacctagattacagaaatgacaatgaatttatca 741
Query: 373 gtgtccttgggcaagtgtgcttgagtttttaagtcaccagcaacatcagggtggcatgag 432
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 740 gtgtccttgggcaagtgtgctggagtttctaagtcaccagcaacatcagggtggcatgag 681
Query: 433 ataagtcctgctatcttatgtcatttgactcctggagtggcaagacaaagccccaaaggt 492
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 680 ataagtcctgctatcttatgtcatttgacttctggagtggcaagacaaagccccaaaggt 621
Query: 493 ttgatggaggcttcaacacttgttgagccttcatctccttacccatctggcgttggagta 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttgatggaggcttcaacacttgttgagccttcatctccttacccatctggcgttggagta 561
Query: 553 cacaatgcctagggccctacctgcaggacagacctccgtagagcacagtgacaagttatt 612
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 560 cacaatgcctagggccctacctgcaggacagacctccgtagagtacagtgacaagttatt 501
Query: 613 ttgtcagtcaggcaaattaactagaactagactcttcattgtataataatcaattaaaat 672
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 500 ttgtcagtcaggcaaattaactagaaccagactcttcattgtataataatcaattataat 441
Query: 673 attgcacatcatgcatgtgactat 696
||||||||||||||||||||||||
Sbjct: 440 attgcacatcatgcatgtgactat 417
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space: 746769
Effective search space used: 746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no216_i01.g1 MSMg01no216_i01.g1 CHROMAT_FILE:
MSMg01no216_i01.g1 PHD_FILE: MSMg01no216_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:32 2005
(657 letters)
>mm_chr1_150574211_150575267
Length = 1057
Score = 1156 bits (598), Expect = 0.0
Identities = 643/658 (97%), Gaps = 2/658 (0%)
Strand = Plus / Plus
Query: 1 tatgcacttcagttctgaggttacaggagatatagaaacaataggtaagaccagttttac 60
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 201 tatgcacttcagttctgaggttacaggagatatagaaacaatagggaagacaagttttac 260
Query: 61 ccaatggccttttgtgacatttttgtggtgcataaactttattgaactttattttttatt 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 ccaatggccttttgtgacatttttgtggtgcatacactttattgaactttattttttatt 320
Query: 121 aagtatcactatagaaacaaatctctgaggctatttatgagggtttatttataagagatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtatcactatagaaacaaatctctgaggctatttatgagggtttatttataagagatg 380
Query: 181 gattaaggttgaaaaaccaaatgaattaagggtggaaagccatactaaatgttgtcagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattaaggttgaaaaaccaaatgaattaagggtggaaagccatactaaatgttgtcagca 440
Query: 241 ctattctatgttcgatggtcccaaactgagtaaaactgataaattgagataaatagaagc 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 441 ctattctatgttcgatggtcccaaactgagtaaaactgataaactgagataaacagaagc 500
Query: 301 atccatctctctgcttcctgacagtaggcacatgaggtgttctcttccttcagctccatc 360
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||
Sbjct: 501 atccatctctctgcttcctgacagtaggcacacgaggtgttctcttccttctgctccgtc 560
Query: 361 atccctaggaaccatagcataattcagaataaaccttcccttcctccagttgctttctcc 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 atccctaggaaccatagcataactcagaataaaccttcccttcctccagttgctttctcc 620
Query: 421 aggtgttttaccatggtaccaattcaggtaactaatatagctaatagagaggctatttat 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 aggtgttttaccatggtaccaattcaggtaactaatatagctaatagagaggctgtttat 680
Query: 481 atacagtctagacagcagtctcccaacatcttttaatcatctatcctattcttctgtcag 540
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atacagcctagccagcagtctcccaacatcttttaatcatctatcctattcttctgtcag 740
Query: 541 tttatttttaagtttaagctctactatattttagcttatgcaatttgaatatagtt-agt 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 741 tttatttttaagtttaagctctactatattttagcttatgcaatttgaatatagttca-t 799
Query: 600 atttattttttgtattctataatgtttaccaatataatttttctcacacaattttact 657
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 800 atttattttttgtattctataatgtttaccaatataatttgtctcacacaattttact 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
