Query= MSMg01no218_g10.b1 MSMg01no218_g10.b1 CHROMAT_FILE:
MSMg01no218_g10.b1 PHD_FILE: MSMg01no218_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:24 2005
(320 letters)
>mm_chr1_67993432_67994151
Length = 720
Score = 611 bits (316), Expect = e-179
Identities = 316/316 (100%)
Strand = Plus / Plus
Query: 4 ggaattcttgtttccaaggtgacaactacatctccattacttctttaaagaagtgcattt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttgtttccaaggtgacaactacatctccattacttctttaaagaagtgcattt 263
Query: 64 tgatttaaaacttaaaaatatttctagcatgatatgtgaagtaacttaaaatgctctatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgatttaaaacttaaaaatatttctagcatgatatgtgaagtaacttaaaatgctctatt 323
Query: 124 tctgtcccctgtaagcaatcaaaccttttgtaagtttctgactggatatgtttttatcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctgtcccctgtaagcaatcaaaccttttgtaagtttctgactggatatgtttttatcca 383
Query: 184 atgtggctgtaacttgcattatgaaaagaaaatgtaactggactattttacgaaatgatc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atgtggctgtaacttgcattatgaaaagaaaatgtaactggactattttacgaaatgatc 443
Query: 244 tgattttgtacagccaaaaaggtcactgctgcaatttgaatgttcctcatactcaatttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgattttgtacagccaaaaaggtcactgctgcaatttgaatgttcctcatactcaatttt 503
Query: 304 cattgtcagtgtaata 319
||||||||||||||||
Sbjct: 504 cattgtcagtgtaata 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no218_g10.g1 MSMg01no218_g10.g1 CHROMAT_FILE:
MSMg01no218_g10.g1 PHD_FILE: MSMg01no218_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:24 2005
(291 letters)
>mm_chr1_68137949_68138638
Length = 690
Score = 540 bits (279), Expect = e-158
Identities = 285/287 (99%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 1 caagttaagctgctttgatagttattttagttgcctgaagatgtttctgcctaagagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 486 caagttaagctgctttgatagttattttagttgcctgaagatgtttctggctaagagtgt 427
Query: 61 gaggtggttttgtgtgtgtgcatcacagagtatgggcatatgtgcatatatgttggagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gaggtggttttgtgtgtgtgcatcacagagtatgggcatatgtgcatatatgttggagag 367
Query: 121 taagaatagataaagaaatgacaagaacatgaggtcaaaatggggaaaataaaccgaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 taagaatagataaagaaatgacaagaacatgaggtcaaaatggggaaaataaaccgaggg 307
Query: 181 atgtgtcaatcttcctcacccacttcttgcacttgatctgaaccttaacagagtcagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atgtgtcaatcttcctcacccacttcttgcacttgatctgaaccttaacagagtcagagg 247
Query: 241 ataaagtatgtcaaagaagttcctttcagaggacaacttgtcattta 287
|||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ataaagta-gtcaaagaagttcctttcagaggacaacttgtcattta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
